| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2957 |
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| Symbol | |
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| ID | 4279862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3553548 |
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| End bp | 3555701 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135777 |
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| Product | pyridine nucleotide-disulphide oxidoreductase dimerisation region |
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| Protein accession | YP_751635 |
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| Protein GI | 114564121 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG0398] Uncharacterized conserved protein
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA AAATTGTGTT ATTACTGATT GCTGCATCAT TAGTGGGATT ATTTTTCCAC
TTTGATTTGC ATCAATTACT GACCTTAGAG GGCCTAAAAG GCTCAATGAA TGACTTTAGT
CAATTACGTG AACAGTCACC ATTGTTAGTT ATTGGCGGGT TCTTTTTATT GTATGTGGCC
GTGACCGCAT TGTCTTTACC TGGTGCCGCG ATTCTTACCA TCGCCTCGGG AGCCTTATTC
GGCATCGTCG AAGGATTAAT TATTGCGTCG TTTGCCTCGA GTATTGGCGC AACAATGGCA
TTTTTAGTGT CGCGTTATCT GTTGCGTGAT TCAATTAAAC AACGTTTTCC AGAGCGCTTA
GCGGCCATTG ATACCGGAAT TGAAAAAGAA GGTGGCTTTT ACTTATTTAC CTTACGTTTG
GTACCAATAT TTCCGTTCTT TTTAATCAAC ATGCTAATGG GTGTGACCGC CTTTAAATCG
TGGACTTTCT ATTGGGTAAG CCAAGTCGGT ATGTTTTTGG GTACCTTTGT TTACGTTAAT
GCCGGTACTC AGCTGGCACA AATTGACAGC TTATCGAACA TTTTATCGGT TAACCTTATC
CTGTCGTTTG CACTATTAGG TTTATTCCCG CTTATCGCTA AGGCAATAGT CAATATGATC
AAAAAACGTC GTGTATACAG CAAATGGACC AAGCCAGCTA AATTTGATCG CAACATGATT
GTGATTGGCG CAGGTGCTGG TGGCCTAGTA ACCAGTTATA TTGCTGCCGC AGTAAAAGCT
AAAGTGACCT TAATTGAAGC CGGCGAAATG GGCGGCGACT GCTTAAACTA TGGCTGTGTG
CCGAGTAAAG CGATTATTAA AAGCGCTAAA ATTGCTCAGC AAATACGAAA CGCCCATCAT
TACGGCTTAG AAGACAGCAC TCCTGAATTC TCATTTAAAA AAGTCATGGC GCGGGTGCAT
CAAGTGGTGG CAGATATAGC TCCACACGAC AGTGTTGAGC GTTACACTAA TTTAGGTGTC
GACGTAGTCA AAGGCTATGC AAAATTAGTT GACCCATGGA CAGTTGAAAT TAGCCACCCA
GACGGTAATA CCAGCCGCTT AACCGCGCGT AGTATTGTTA TTGCCACAGG TGCTCGCCCG
TTTGTGCCAC CGTTACCAGG CATAGAAGAA GTCGGTTATG TTACCAGTGA TACCTTGTGG
GATGAGTTTG CAAAACTCGA TACAGCACCA CAAAAATTAG TGGTACTAGG CGGCGGCCCA
ATTGGTTCTG AACTGGCACA AAGCTTTGCC CGTTTAGGAT CCAAAGTGAC TCAAGTTGAA
ATGGCTGAGC GCATCATGAT CAAAGAAGAT CTTGAAGTGT CTGAGTTTGC GACCCAAGCC
TTGCAAAAAA GTGGTGTGAA TATTTTAACC TCACATCAAG CGCTGCGCTG CGAACTGCGT
GACGGTAAAA AATACCTTAT CGTTAAGCAT CAAGAGCAAG AGTTAGCGTT AGAGTACGAC
CAGCTTTTAT GTGCAGTCGG TCGCAGTGCC CGCTTAAGCG GTTACGGCTT AGAAGAGTTA
GGCATTGAAA CCAACCGCAC TATCGTCACC AATGAATATT TAGAAACCTT ATACCCAAAT
ATCTATGCGG CGGGTGACAT TGTTGGGCCT TATCAATTTA CTCACGTAGC TGCGCATCAA
GGCTGGTACG CGGCAGTCAA TGGACTGTTT GGCCACTTGA AAAAGTTCAA AGTCGATTAC
CGCGTTATTC CATGGACTAC GTTTATCGAT CCAGAAGTGG CTCGTGTAGG TATTAATGAA
TATGAAGCCA AACAGCAAGG TATTGATTAC GAGGTAACTC GCTTTGATTT TGCCGAGCTT
GATCGTGCCA TTACCGACAG TGCTACCGAA GGGTTTATTA AAGTGATTAC CCCTAAAGGT
AAAGATAAAA TCTTAGGTGT GACCGTGGTG TCTGAACACG CTGGTGATTT AATTGCGGAA
TTTGTATTAG CTATGAAGCA CGGCTTAGGC CTTAACAAGA TTCTAGGCAC CATACACAGT
TACCCAACAT GGGCCGAAGG CAACAAGTAC GCTGCGGGTG AATGGAAGCG TAACCATGCA
CCAGAAACTG TGTTGCGCTG GTTAGAAAAA TACCACACTT GGCGTCGTGG CTAG
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| Protein sequence | MFKKIVLLLI AASLVGLFFH FDLHQLLTLE GLKGSMNDFS QLREQSPLLV IGGFFLLYVA
VTALSLPGAA ILTIASGALF GIVEGLIIAS FASSIGATMA FLVSRYLLRD SIKQRFPERL
AAIDTGIEKE GGFYLFTLRL VPIFPFFLIN MLMGVTAFKS WTFYWVSQVG MFLGTFVYVN
AGTQLAQIDS LSNILSVNLI LSFALLGLFP LIAKAIVNMI KKRRVYSKWT KPAKFDRNMI
VIGAGAGGLV TSYIAAAVKA KVTLIEAGEM GGDCLNYGCV PSKAIIKSAK IAQQIRNAHH
YGLEDSTPEF SFKKVMARVH QVVADIAPHD SVERYTNLGV DVVKGYAKLV DPWTVEISHP
DGNTSRLTAR SIVIATGARP FVPPLPGIEE VGYVTSDTLW DEFAKLDTAP QKLVVLGGGP
IGSELAQSFA RLGSKVTQVE MAERIMIKED LEVSEFATQA LQKSGVNILT SHQALRCELR
DGKKYLIVKH QEQELALEYD QLLCAVGRSA RLSGYGLEEL GIETNRTIVT NEYLETLYPN
IYAAGDIVGP YQFTHVAAHQ GWYAAVNGLF GHLKKFKVDY RVIPWTTFID PEVARVGINE
YEAKQQGIDY EVTRFDFAEL DRAITDSATE GFIKVITPKG KDKILGVTVV SEHAGDLIAE
FVLAMKHGLG LNKILGTIHS YPTWAEGNKY AAGEWKRNHA PETVLRWLEK YHTWRRG
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