Gene Sfri_2954 details

Gene Information

• Locus tag: Sfri_2954
• ID: 4279859
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 3548430
• End bp: 3550388
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638135774
• Product: iron permease FTR1
• Protein accession: YP_751632
• Protein GI: 114564118
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0672] High-affinity Fe2+/Pb2+ permease
• TIGRFAM ID: [TIGR00145] FTR1 family protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTCAACA GATGTCTGTT GGTTGTCATT GCCACGGTGT TTTCAACGTC TTTATGGGCA 
CAAAGCCCGG CAGTCACGTC ACACGAGATA TCACACGAGA CATCACCAGA TCTTTTAAAA 
CAAACACGAC AAATTCTTCA ATTAGCTGAA TACATTGGTG TTGATTATTC AGAAGCCGTA 
ACCGAAGGTA GTATCTCTAA TCCAGATGAA TTTGCTGAAA TGCAGCAATT CGCTAGCATC 
ATTATCGAAA AAACAAACCT GCTCGCCAAT GATGTGCCAA ATTCATTAAC GGCCGATGCA 
TTACAATTAC AGCAAGCCAT TGTAGACAAA TCATCGCTGG ATGTTATTCA AGGGCTTAGC 
CAAAAAATAC GTAACCAGTT ATTAAGCCAG TCTCCAGCAT TAGTGTTACC AACACAGCTT 
TTAGCTAAAG AGAATGTTAG ACAGCTGTTT ATCGAAAATT GTTCAACATG TCATGGTGAT 
TTAGGCCAAG GCAATGGACC ACTGGCCAAA TCATTGTCAC CAGAGCCAAC CAACTTTACT 
GATCAAGAAC GTGCATTAAA CCGTTCATTA TTGGGGCTTT ATGATGCGAT TTCAGATGGT 
TTAGATGGCA GTGCGATGCG TGCTTTTAGT GAGTTAAATG ATCAACAGCG TTGGTCACTG 
GCTTTCTATG TTGGTAGTTT AGCTTTTGAG CCAACAGCAA TTACCACGAA GCACATCGAG 
AATGATGCGA ATATTGAATT ACAACAGTGG GTCAATAGCA ATCCAACCCA GTTAATTCAG 
CAAAATGTCG AAATTGATAA AGCTCAATTA ACATTACTCC GTTCACAACC TGAGTTACTG 
TTTCAACATG CTGACTCGCC TATTTCGGTA GCCCGCACTA ACTTACAGGC TGCTGTAAAA 
GCATATCAAG CCAATGAGTT AGCACAAGCG CAAACCTTAG CCGTTAGCGC CTATCTCGAC 
GGTTTTGAAT TAATTGAGAA CAATTTAGAT GCTCACGACA GTAGTTTGCG TAAATCGATT 
GAAAGCCAGC TGCTTAATTT TAGAAACATC CTAAAAACAG CAGGACAGGA TAACCAGGTA 
AATCAACAGT TAACCAGTAT ACTGGCTCAG CTGGACCAAG CGGACACACT ACTAACGGGA 
CAATCACTAT CCAATAACGC CATGTTTTCG GCAGCATTAA TCATCTTGCT ACGCGAAGGA 
TTAGAAGCAC TGCTCGTTAT CATTGCCTTA ATGACAGTGT TAATTAAAAC CGAACGTCAG 
GATGCGATTA AATTTGTTCA CTTTGGTTGG ATATCAGCAC TTGCCACTGG TGTATTAACC 
TGGTGGGCTG CAGATAACCT GATTAGCATT AGCGGAGCCT CAAGGGAGTT AATGGAAGGT 
GGTGCTGCAT TGCTGGCCGC ATTGGTATTG TTCTATGTTG GTTATTGGAT GCACAGTAAA 
ACCCAAGGTT CTAAATGGCA AAGTTACATT AAAAATAATG TCGACCGCCA TTTAAACACT 
GGCACGTTAT GGGGTCTCAC TGGGCTTGCG TTTATTTCGG TCTATCGTGA AGTCTTTGAA 
ACGATTTTGT TCTATCAGTC ATTACTGACA CAAGCCATAG GCTCTGCCAG CAGCAATGAA 
CAAGTGAGTT ACTTAGTTTA CGGCTTGCTA GCAGGTATGG CTATTTTAGC GGTAATTGCT 
TGGTTAATGA TGCGCTATTC AGTTAAATTG CCATTAGCCC GCTTTTTTGC GGTGAGTTCT 
TACTTCATGC TTATTTTAGC GTTTATCTTG GCAGGAAAAG GGATTTCAGC GTTACAAGAA 
GCTGCTGTAA TTAGCCTCAC GCCCTTCCCT ATAGATGTGT CGATTAGCTG GTTAGGAATA 
GCGTCTACAT GGCAAGGTTT GGGTACACAA ATGGTGATCG TAGTATTGTT TAGTTTACTG 
GCTATCCGTA ATCGTACTCA AAGCCTTACT ACTCACTAA 

 

Protein sequence

MFNRCLLVVI ATVFSTSLWA QSPAVTSHEI SHETSPDLLK QTRQILQLAE YIGVDYSEAV 
TEGSISNPDE FAEMQQFASI IIEKTNLLAN DVPNSLTADA LQLQQAIVDK SSLDVIQGLS 
QKIRNQLLSQ SPALVLPTQL LAKENVRQLF IENCSTCHGD LGQGNGPLAK SLSPEPTNFT 
DQERALNRSL LGLYDAISDG LDGSAMRAFS ELNDQQRWSL AFYVGSLAFE PTAITTKHIE 
NDANIELQQW VNSNPTQLIQ QNVEIDKAQL TLLRSQPELL FQHADSPISV ARTNLQAAVK 
AYQANELAQA QTLAVSAYLD GFELIENNLD AHDSSLRKSI ESQLLNFRNI LKTAGQDNQV 
NQQLTSILAQ LDQADTLLTG QSLSNNAMFS AALIILLREG LEALLVIIAL MTVLIKTERQ 
DAIKFVHFGW ISALATGVLT WWAADNLISI SGASRELMEG GAALLAALVL FYVGYWMHSK 
TQGSKWQSYI KNNVDRHLNT GTLWGLTGLA FISVYREVFE TILFYQSLLT QAIGSASSNE 
QVSYLVYGLL AGMAILAVIA WLMMRYSVKL PLARFFAVSS YFMLILAFIL AGKGISALQE 
AAVISLTPFP IDVSISWLGI ASTWQGLGTQ MVIVVLFSLL AIRNRTQSLT TH