| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2951 |
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| Symbol | gltB |
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| ID | 4279856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3541024 |
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| End bp | 3545472 |
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| Gene Length | 4449 bp |
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| Protein Length | 1482 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135771 |
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| Product | glutamate synthase subunit alpha |
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| Protein accession | YP_751629 |
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| Protein GI | 114564115 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTGT ATCATCCCAG TTTTGAGCGT GACAATTGCG GATTTGGTTT GATTGCACAA
ATGGACGGCG ACGCAAGTCA CCGCATTGTG CGTACCGCGA TTCATGGTCT CGATCGAATG
AAGCATCGTG GTGGTATTGC AGCTGACGGA CGCACAGGTG ATGGCTGTGG TCTATTAATG
CAAATGCCTA CAGATTTTTT TGAAGCTATT GCGGCAGAAA ACGATTGGCA TTTAAGCCGA
AAATTTGCCG TAGGTATGCT ATTTCTCAGC CAAGATGAAC AACGCGCTGA TGAAGCGAAG
TTTATCTTAG AAAAAGAACT ACAACGAGAA ACACTCAGTG TCGCTGGCTG GCGTAAAGTA
CCGATTAATC CGGATGTCTT GGGGGAGATT GGTCGGGAAA GCTTGCCACA AATTTATCAA
GTATTGATCA ACGCGCCAGT AGGCTGGCGA GAAAAAGATC TCGAGCGTCG CCTATATATG
GCTCGCCGCC GCCTTGAACA ACAAATCACC GATGACAAAG ACTTTTATGT CGCCAGTCTT
TCTGGACAAG TCATTGTGTA TAAAGGCTTA ATGATGCCAG CAGATCTGCC ATCATTTTAC
ACTGACCTTG CAGACATTCG CTTGAAAAGT GCTATTTGTT TATTTCATCA GCGCTTTTCA
ACTAACACAT CGCCAAAATG GCCATTAGCT CAACCGTTTC GTTACCTCGC TCATAACGGC
GAAATCAATA CCATTACCGG TAACCGCCAA TGGGCAAGAG CGCGCGCCTA TAAGTTTAAT
TCGCCTTTGC TACCAGATTT ACAACAAGCG GCCCCTTTTG TTAACGAAAC AGGTTCAGAC
TCGTCTTCTT TAGACAATAT GCTCGAAATG TTGTTATCAG GCGGGATGGA TTTATATCGA
GCCATGCGAT TGCTTATTCC ACCAGCATGG CAATCAAATC CTGAAATGGA TGACGAGTTA
AAGGCCTTTT ACGATTTTAA CTCAATGCAC ATGGAGCCGT GGGACGGCCC TGCAGGCATT
GTAATGACCA ATGGCCGCCA TGCTGCCTGC GCGGTAGATC GTAACGGTCT ACGCCCTTCA
CGTTACGTTA TAACCAAGGA TCGTATCCTC ACCTTAGCGT CTGAAGTCGG TATTTGGGAT
TATTCCGCCG ATGAAGTGAT TGAAAAAGGC CGGGTTGGGC CCGGTGAGTT ATTAGTGTTA
GATACCTTGA ATGGTCGTTT GTATCATTCA TTTGAAATTG ATAATGACTT AAAGCGTCGT
CATCCTTACA AAGAGTGGAT GGCTAAAAAC AGTCAGACAT TGATCCCTGC TGAGGAAATG
GCTCCTACCA AACAAGGTTC AAGTGGTTTT GATAGCAAAA CACTGCTGCA ATATCAAAAA
CAGTTTGGTT TTACCCGTGA AGAATTAGAA CAAGTTATTT GGGTACTTGC GAGCAAAGGT
GAAGAAGCCA TTGGCTCAAT GGGTGATGAT ACGCCTATGG CAGTATTGTC GAAAAAGTCG
CGTTCACTGT ACGACTATTT CCGCCAAAAA TTTGCTCAGG TAACCAACCC GCCTATTGAT
CCGTTACGTG AAAAACACGT GATGTCGTTA GCCACTTGTG TCGGTCGCGA ACAAAATCTA
TTTAGCGAAA CCACCGGTAA CGCTTACCGA GTCATGTTCA ATTCACCGAT TTTGTTATTC
AGTGATTTTA ATCAGTTACT GGGATTAGAC AGCACTAACT ATCGCGCCAA CACAGTTGAT
TTAAACTATG ATGCCAATGA AACGTTAGAG CAGGCTATTC GCCGTATTAC CGACGAAGCT
GAACGCTTAG CTCGCAGCGG CACGACATTG TTAGTATTGT CTGACCGTGC TGTAGCGAAA
AGTGCTCAAG TTATCCCAGC CGCTATGGCT GTGGGTTCTG TGCAAACTCG TTTAGTGGAT
AAAAGCCTAC GTTGTGACAC TAACATTATT GTTGAAACAG CTTCAGCACG CGATCCGCAT
CATTTTGCGG TGTTAATTGG TTTTGGTGCC ACGGCTATCT ACCCTTACCT CGCCTATGAA
TCTATTTCAG CAATGGCAAA ACTGCATCAA GTCGATGATG TAACCCATTT AATGCTTAAC
TTCCGTTATG GCATTGAAAA AGGCTTACGC AAAATCATGT CTAAAATGGG CATCAGTACC
GTAGGTTCAT ATCGTTGTAG CCAACAATTT GAAGCTGTGG GTTTAGCCAG TGATGTGATT
GAGTTATGTT TTAAAGGCGT GATAAGCCGT ATTGAAGGTG TCAGTTTTAA TCATATTGCC
GATGACCAGA AAATACTCCA TACCGCTGCA TATCGCGCCC ATGTGCCATT ACCACAAGGT
GGTTTATTAA AGTACGTTGA AGGTGGTGAA TATCACTGCT TTAATCCAGA CGTGGTGAAT
ACCTTACAAG CATCATTAAA AGACAAAAAC TACGCTGAAT ACAAAAAGTT TACTCACTTA
GTTGATGATC GCCCAGTGGC CACGTTACGT GATTTAATCG GCATTAAAGG TCAACTAAAT
GCCATTGAAA TAGACACGGT CGAAGGCGCT GAAAAGCTTT ACCCTCGCTT TGATAGCGCA
GCCATGAGCA TTGGTGCTTT AAGCCCTGAA GCTCATGAAG CGTTAGCGGT TGCGATGAAC
CGTCTTGGTG GACGTTCAAA CTCAGGTGAA GGTGGCGAAG ATGCACGTCG TTTCAATAGC
GAACGTAACT CGGCCATCAA ACAAATTGCA TCGGGTCGCT TTGGCGTTAC CGCGCATTAC
TTAGTTAACG CTGATGTGCT GCAAATTAAG GTAGCTCAAG GTGCAAAACC GGGTGAAGGT
GGGCAATTAC CTGGCCATAA AGTCAGTGTT GAAATCGCAG GGCTGCGTCA TGCTCGTCCA
GGTGTGACCT TGATTTCACC GCCGCCGCAC CACGATATTT ACTCGATTGA AGATTTAGCT
CAGCTGATTT TCGATTTAAA ACAAATCAAT CCAAAAGCCT TAGTGTCGGT CAAGCTAGTA
TCAGAACCCG GTGTTGGCAC CATTGCAACT GGTGTTGCAA AAGCCTATGC CGATATGATC
ACTATATCAG GTTACGACGG CGGCACTGGC GCAAGTCCTA TCACCTCGGT GAAATACGCT
GGTTCTCCTT GGGAGCTTGG TTTAGCGGAA GTGCATCAGT CGCTAGTAGA AAATGGTTTA
CGTCATAAAA TCCGCCTGCA AGTGGATGGC GGCTTAAAAA CCGGTACCGA CGTGATTAAA
GCAGCGTTAC TGGGCGCCGA AAGCTTTGGC TTTGGTACAG TGCCGATGAT TGCGCTTGGG
TGTAAATACT TACGTATTTG TCATCTTAAT AACTGCGCTA CCGGTGTGGC AACTCAAGAT
AAAAACTTAC GCGAAAACCA TTATCACGGT TTACCTGAAC GTGTCATGAC CTACTTTGAA
TTTGTGGCTC AAGAAGTGCG TGAATGGATG GCTGCATTAG GGGTAACTCA ATTCGAAGAT
TTAGTCGGAC GGAGCGACTG GTTACATGCG CTTGAAGGTC AAACAGACAA GCAGCGTGGC
TTAGATTTAG CACCAATTTT ATATAAACCA AAAGTACAGG CAAACTCATC TCTGACTTGG
AAAGAAATCA ATCCGCCTTC AGATGTTGGC CAACTGAATC AAACCTTGTT AGCGGATTGT
CGTAAAGCAG TTGAAACTGG CGAACCGTTT TCTTATCAAT ATCAAATCAA TAATACCGAT
CGCTCGGTAG GCGCGACATT GTCAGGTTTT ATCGCTACGA CTGTTGGTGT AACGGGTGCA
AAGCAGCCGT TAACACTTGG TTTTAATGGC AGCGCTGGCC AAAGCTTTGG CGTATGGAAC
AGCCCAGGCC TTGAACTTAA GCTGTGCGGT GATGCTAATG ATTATGTCGG CAAAGGCATG
TCTGGCGGTA AGATCGTTAT TCACCCACCT ATTGGTAGCC CGTTCCAAAG TGAACGTAGT
GCCATTATGG GTAATACCTG TTTATACGGT GCTACTGGCG GTAAGTTGTT TGCTGCAGGC
CAAGCGGGCG AGCGATTCGC TGTGCGTAAC TCTGGCGCTA TCGCGGTCGT TGAAGGCAGT
GGCGATAATT GTTGCGAATA CATGACAAGC GGTATCGTGG TTATTCTAGG GAAAACTGGG
GTCAACTTCG GTGCAGGCAT GACGGGCGGA TTTGCCTATG TATTTGACCA ATTTGGTCGC
TTTAATCGCC GAGTGAACAC CGAAATGGTC GACACTCAAA AATTAGAATC TACCATCCAC
CAGCAACACT TAAAAGGCCT AATTGAAACT CACTATGCTG AAACCGGCAG TGAACATGCT
CATATGATTT TAAGTGATTT TGAAAACTGG TTGGATTGTT TCGTATTAGT TAAACCAAAG
AATATTGCCG TTGCTGACCT GCTAAAAATT GAGCAGAAGA GTCCGGAATT AGTAGTAAAG
GCAGGGTAA
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| Protein sequence | MSLYHPSFER DNCGFGLIAQ MDGDASHRIV RTAIHGLDRM KHRGGIAADG RTGDGCGLLM
QMPTDFFEAI AAENDWHLSR KFAVGMLFLS QDEQRADEAK FILEKELQRE TLSVAGWRKV
PINPDVLGEI GRESLPQIYQ VLINAPVGWR EKDLERRLYM ARRRLEQQIT DDKDFYVASL
SGQVIVYKGL MMPADLPSFY TDLADIRLKS AICLFHQRFS TNTSPKWPLA QPFRYLAHNG
EINTITGNRQ WARARAYKFN SPLLPDLQQA APFVNETGSD SSSLDNMLEM LLSGGMDLYR
AMRLLIPPAW QSNPEMDDEL KAFYDFNSMH MEPWDGPAGI VMTNGRHAAC AVDRNGLRPS
RYVITKDRIL TLASEVGIWD YSADEVIEKG RVGPGELLVL DTLNGRLYHS FEIDNDLKRR
HPYKEWMAKN SQTLIPAEEM APTKQGSSGF DSKTLLQYQK QFGFTREELE QVIWVLASKG
EEAIGSMGDD TPMAVLSKKS RSLYDYFRQK FAQVTNPPID PLREKHVMSL ATCVGREQNL
FSETTGNAYR VMFNSPILLF SDFNQLLGLD STNYRANTVD LNYDANETLE QAIRRITDEA
ERLARSGTTL LVLSDRAVAK SAQVIPAAMA VGSVQTRLVD KSLRCDTNII VETASARDPH
HFAVLIGFGA TAIYPYLAYE SISAMAKLHQ VDDVTHLMLN FRYGIEKGLR KIMSKMGIST
VGSYRCSQQF EAVGLASDVI ELCFKGVISR IEGVSFNHIA DDQKILHTAA YRAHVPLPQG
GLLKYVEGGE YHCFNPDVVN TLQASLKDKN YAEYKKFTHL VDDRPVATLR DLIGIKGQLN
AIEIDTVEGA EKLYPRFDSA AMSIGALSPE AHEALAVAMN RLGGRSNSGE GGEDARRFNS
ERNSAIKQIA SGRFGVTAHY LVNADVLQIK VAQGAKPGEG GQLPGHKVSV EIAGLRHARP
GVTLISPPPH HDIYSIEDLA QLIFDLKQIN PKALVSVKLV SEPGVGTIAT GVAKAYADMI
TISGYDGGTG ASPITSVKYA GSPWELGLAE VHQSLVENGL RHKIRLQVDG GLKTGTDVIK
AALLGAESFG FGTVPMIALG CKYLRICHLN NCATGVATQD KNLRENHYHG LPERVMTYFE
FVAQEVREWM AALGVTQFED LVGRSDWLHA LEGQTDKQRG LDLAPILYKP KVQANSSLTW
KEINPPSDVG QLNQTLLADC RKAVETGEPF SYQYQINNTD RSVGATLSGF IATTVGVTGA
KQPLTLGFNG SAGQSFGVWN SPGLELKLCG DANDYVGKGM SGGKIVIHPP IGSPFQSERS
AIMGNTCLYG ATGGKLFAAG QAGERFAVRN SGAIAVVEGS GDNCCEYMTS GIVVILGKTG
VNFGAGMTGG FAYVFDQFGR FNRRVNTEMV DTQKLESTIH QQHLKGLIET HYAETGSEHA
HMILSDFENW LDCFVLVKPK NIAVADLLKI EQKSPELVVK AG
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