| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2946 |
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| Symbol | |
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| ID | 4279851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3535347 |
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| End bp | 3536015 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135766 |
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| Product | DNA mismatch repair protein |
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| Protein accession | YP_751624 |
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| Protein GI | 114564110 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3066] DNA mismatch repair protein |
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| TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0152588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAT CATCGCCCTT AGATCTAAAC GAATTAATGC AAAGAGCGCA CAATATGGCT
GGTATTCGTT TAGCTGATAT TGCGGCAGAT AATCACATCA TGGTGCCTGC GGATTTACGC
CGAGACAAAG GCTGGGTAGG CCAACTTATT GAATCTGAAT TAGGGGCTCT GGCAGGATCA
AGACCAGAAC AGGACTTTTT ACATTTAGGG GTTGAGCTCA AAACGATCCC GATCGATCAC
AATGGCAAAC CGCTTGAGAC CACTTATGTC ACAGTAGCGC CGCTGACAAA CATTCAGGGT
ATGACTTGGG AAAACAGTTT GGTTTACCAT AAATTACAGA GAGTGTTATG GGTACCTGTT
GAAGGCGAAC GGAGCATCAC TGTCGGTGAG CGTCGTATAG GCACGCCCAT ATTATGGCAA
CCAAACACAA CACAAGCCAG ACAGTTACAA CAAGATTGGG AAGAGATAAT GGAGTTAATT
GCACTAGGTA AAGTTGATAA AATTACTGCA CGTCATGGTG AGGTACTGCA ATTACGTCCA
AAAGCAGCTA ATAGCAAAAC GCTTACTGAA AGCATCGCCG AAGACGGTAG CATCCAACTA
TCAAATCCCA GAGGTTTTTA TCTTAAAATT GATTTTACTC AGCAGATATT AACCAATGCA
TTTTCATAA
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| Protein sequence | MAKSSPLDLN ELMQRAHNMA GIRLADIAAD NHIMVPADLR RDKGWVGQLI ESELGALAGS
RPEQDFLHLG VELKTIPIDH NGKPLETTYV TVAPLTNIQG MTWENSLVYH KLQRVLWVPV
EGERSITVGE RRIGTPILWQ PNTTQARQLQ QDWEEIMELI ALGKVDKITA RHGEVLQLRP
KAANSKTLTE SIAEDGSIQL SNPRGFYLKI DFTQQILTNA FS
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