| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2939 |
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| Symbol | nhaR |
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| ID | 4279844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3527115 |
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| End bp | 3528038 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135759 |
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| Product | transcriptional activator NhaR |
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| Protein accession | YP_751617 |
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| Protein GI | 114564103 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCATT TAAATTATAA CCATTTATAT TATTTTTGGA TGGTACAAAA AAAGGGTTCA
GTAACTAAAG CGGCTGAAGC ATTGTGTTTG GCTCCGCAAA CCATAACTGG GCAAATTCGT
GCATTAGAAG AGCGATTAAA AGGCACGTTA TTTAAGCGTG TCGGCCGTAA CTTAGTCGCA
ACCGAGTTGG GCGAATTAGT ATTTCGTTAT GCCGATAAAA TGTTTAGCTT GAGTTACGAA
ATGCTCGATT TACTCAATTA TCAGAAAGAT AAGTCACTAT TATTTGAAGT GGGGATTGCC
GATGCCTTAT CTAAGGCCTT GGTTAGTCGA GTATTGTTAA CCGTTATCCC TGATGATAGT
TCAGTTCACT TGGCGTGTTA TGAATCAACA CATGAAAGTT TAATTGAGCG TTTACGTGAA
CATAAGCTCG ATATGATCTT ATCTGATTGC GCCGGTGGTT CATTGAAGTT TCCCGAAATT
TTATCCAAAA AACTGGGTGA ATGTGGGGTG AGTTTCTTTT CGGCTGAAAC GATTTCAGTC
CCTTTTCCCG CGTGTCTAGA GCAGCGTAAA TTACTCATAC CGGGTAAGCG GACGTCATTA
GGCCAACAAT TACATGGTTG GTTTGCCGAA AAAAATCTTA ATGTCAGTAT TTTGGGAGAG
TTTGACGATG CAGAAATGAT GAAGGCGTTC GGTTATTTTA ATCGAGGCAT TTTTGTCGCA
CCGTCTATTT ATCGTCATGA TATACTGTCT CAAGGTATGG TATTACTTGG TGAAACCACC
GATATTAAAG AAGAGTATCA TGTGATGTTC GCTGAGCGAA TGATCCAGCA TCCGGCGGTA
AAATCATTAC TGGCTACGGA TTTTAGTGAT TTATTTGCAG GACGAGATCT ACAAGTACAA
GATTTTGAAA ACCGTATAAG CTAG
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| Protein sequence | MQHLNYNHLY YFWMVQKKGS VTKAAEALCL APQTITGQIR ALEERLKGTL FKRVGRNLVA
TELGELVFRY ADKMFSLSYE MLDLLNYQKD KSLLFEVGIA DALSKALVSR VLLTVIPDDS
SVHLACYEST HESLIERLRE HKLDMILSDC AGGSLKFPEI LSKKLGECGV SFFSAETISV
PFPACLEQRK LLIPGKRTSL GQQLHGWFAE KNLNVSILGE FDDAEMMKAF GYFNRGIFVA
PSIYRHDILS QGMVLLGETT DIKEEYHVMF AERMIQHPAV KSLLATDFSD LFAGRDLQVQ
DFENRIS
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