Gene Sfri_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2936 
Symbol 
ID4279841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3524736 
End bp3526352 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content43% 
IMG OID638135756 
ProductL-aspartate oxidase 
Protein accessionYP_751614 
Protein GI114564100 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0029] Aspartate oxidase 
TIGRFAM ID[TIGR00551] L-aspartate oxidase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAG CAGTTGAACA CCAATCTGAC ATTTTGGTCA TCGGCAGCGG TGCTGCAGGA 
CTAACTTTAG CACTACATCT TGCTGAAAAA TCAAAAGTAA TTCTTCTTTC TAAAGGCCCA
TTATCAGAAG GGTCAACATT ATATGCTCAA GGTGGAATCG CCTCTGTTTT TGATGAAGGC
GACACAATTG AGTCCCACGT CAACGATACC TTAATCGCTG GCGCCGGATT ATGCGATAAA
TCAGTTGTGA CATACACCGC AGAAAATGCA AAAAGCGCAA TGCAATGGTT AATTAATTGT
GGTGTGGCAT TTGATAAAGA AGAAACCTTA GCTGGAGTCG ATAATAGTAC AGCCCCTTAT
CACTTAACTC GTGAAGGTGG GCATAGCCAT CGTCGTATTC TGCATTCTGC CGATGCAACT
GGTAAAGCGG TGCAAACCAC TTTGCAAGAA CGTGCAATCG CTCACCCAAA CATACAAGTA
CTTGAACGTT ACAATGCGAT TGATTTAATC ACCACTCGTA AATTGCATCG ACCGGGTAAC
CGTGTACTTG GTGCTTATGT GTGGAATCGC GATGAGGAAC ATGTAGAAAC CGTAAGAGCC
AAGTTTGTTG CACTAGCAAC AGGTGGCAGC TCAAAAGTTT ACCAATACAC CTCTAATCCT
GATATAGCCA GTGGCGACGG TATTGCAATG GCATGGCGTG CAGGTTGTCG TATTGCCAAT
ATGGAATTTA ATCAATTCCA TCCAACGTGT TTATTTCACC CTAATGCCAG AAACTTCCTA
TTAACTGAAG CATTACGCGG TGAAGGTGCT TATTTACGTC GTCCAGATGG CAGCCGTTTT
ATGCCCGACT TCGACGAAAG AGCAGAACTC GCTCCTCGCG ATATTGTTGC TCGCGCCATT
GATTATGAAA TGAAACGTTT GGGTGCCGAT TGTGTCTATT TAGACATCAG CCATAAACCT
GCTGATTTTA TCATTAAACA CTTTCCAACC ATTTATCAGC GTTGTCTTGA GTTGGGCATT
GATATCACCA AAGACCCTAT TCCAGCGGTT CCAGCAGCGC ACTACACATG TGGTGGTGTG
ATGACGGACC TTCATGGTCA AACCGATATT AATGGCTTAT ATGCTATTGG TGAAGTGGCT
TACACAGGCT TACATGGCGC TAATAGACTC GCGAGCAATT CACTACTCGA GTGTTTAGTA
TTTGCCCGTG CAGCTTCACA AGATATCGAA GGTCTGTTGC ATAAAATTCC GATGCCTTGC
CCGATACCAG TATGGGATGA GAGTAAAGTC ACTAACTCTG ATGAAGAAGT CGTCATCGCC
CATAATTGGC ACGAACTACG ACTCTTTATG TGGGATTATG TGGGCATTGT CAGAACAGAT
AAACGATTAG AGCGAGCACT TCGAAGATGC TTAATGCTTC AACAAGAGAT TGAAGAATAT
TATTCAAACT TCCGTGTCAG CAATAATTTA TTAGAGCTAC GTAACTTGGT ACAAGTTGCA
GAATTGATTA TTCGGTGTGC AATGGAACGT AAAGAAAGTC GAGGGCTTCA TTATAATATT
GATTATCCTG AACAAATTGA CAATCCTAAA CCAACCATTT TACAACCCAA CCGTTAA
 
Protein sequence
MKQAVEHQSD ILVIGSGAAG LTLALHLAEK SKVILLSKGP LSEGSTLYAQ GGIASVFDEG 
DTIESHVNDT LIAGAGLCDK SVVTYTAENA KSAMQWLINC GVAFDKEETL AGVDNSTAPY
HLTREGGHSH RRILHSADAT GKAVQTTLQE RAIAHPNIQV LERYNAIDLI TTRKLHRPGN
RVLGAYVWNR DEEHVETVRA KFVALATGGS SKVYQYTSNP DIASGDGIAM AWRAGCRIAN
MEFNQFHPTC LFHPNARNFL LTEALRGEGA YLRRPDGSRF MPDFDERAEL APRDIVARAI
DYEMKRLGAD CVYLDISHKP ADFIIKHFPT IYQRCLELGI DITKDPIPAV PAAHYTCGGV
MTDLHGQTDI NGLYAIGEVA YTGLHGANRL ASNSLLECLV FARAASQDIE GLLHKIPMPC
PIPVWDESKV TNSDEEVVIA HNWHELRLFM WDYVGIVRTD KRLERALRRC LMLQQEIEEY
YSNFRVSNNL LELRNLVQVA ELIIRCAMER KESRGLHYNI DYPEQIDNPK PTILQPNR