Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2936 |
Symbol | |
ID | 4279841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3524736 |
End bp | 3526352 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135756 |
Product | L-aspartate oxidase |
Protein accession | YP_751614 |
Protein GI | 114564100 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0029] Aspartate oxidase |
TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAG CAGTTGAACA CCAATCTGAC ATTTTGGTCA TCGGCAGCGG TGCTGCAGGA CTAACTTTAG CACTACATCT TGCTGAAAAA TCAAAAGTAA TTCTTCTTTC TAAAGGCCCA TTATCAGAAG GGTCAACATT ATATGCTCAA GGTGGAATCG CCTCTGTTTT TGATGAAGGC GACACAATTG AGTCCCACGT CAACGATACC TTAATCGCTG GCGCCGGATT ATGCGATAAA TCAGTTGTGA CATACACCGC AGAAAATGCA AAAAGCGCAA TGCAATGGTT AATTAATTGT GGTGTGGCAT TTGATAAAGA AGAAACCTTA GCTGGAGTCG ATAATAGTAC AGCCCCTTAT CACTTAACTC GTGAAGGTGG GCATAGCCAT CGTCGTATTC TGCATTCTGC CGATGCAACT GGTAAAGCGG TGCAAACCAC TTTGCAAGAA CGTGCAATCG CTCACCCAAA CATACAAGTA CTTGAACGTT ACAATGCGAT TGATTTAATC ACCACTCGTA AATTGCATCG ACCGGGTAAC CGTGTACTTG GTGCTTATGT GTGGAATCGC GATGAGGAAC ATGTAGAAAC CGTAAGAGCC AAGTTTGTTG CACTAGCAAC AGGTGGCAGC TCAAAAGTTT ACCAATACAC CTCTAATCCT GATATAGCCA GTGGCGACGG TATTGCAATG GCATGGCGTG CAGGTTGTCG TATTGCCAAT ATGGAATTTA ATCAATTCCA TCCAACGTGT TTATTTCACC CTAATGCCAG AAACTTCCTA TTAACTGAAG CATTACGCGG TGAAGGTGCT TATTTACGTC GTCCAGATGG CAGCCGTTTT ATGCCCGACT TCGACGAAAG AGCAGAACTC GCTCCTCGCG ATATTGTTGC TCGCGCCATT GATTATGAAA TGAAACGTTT GGGTGCCGAT TGTGTCTATT TAGACATCAG CCATAAACCT GCTGATTTTA TCATTAAACA CTTTCCAACC ATTTATCAGC GTTGTCTTGA GTTGGGCATT GATATCACCA AAGACCCTAT TCCAGCGGTT CCAGCAGCGC ACTACACATG TGGTGGTGTG ATGACGGACC TTCATGGTCA AACCGATATT AATGGCTTAT ATGCTATTGG TGAAGTGGCT TACACAGGCT TACATGGCGC TAATAGACTC GCGAGCAATT CACTACTCGA GTGTTTAGTA TTTGCCCGTG CAGCTTCACA AGATATCGAA GGTCTGTTGC ATAAAATTCC GATGCCTTGC CCGATACCAG TATGGGATGA GAGTAAAGTC ACTAACTCTG ATGAAGAAGT CGTCATCGCC CATAATTGGC ACGAACTACG ACTCTTTATG TGGGATTATG TGGGCATTGT CAGAACAGAT AAACGATTAG AGCGAGCACT TCGAAGATGC TTAATGCTTC AACAAGAGAT TGAAGAATAT TATTCAAACT TCCGTGTCAG CAATAATTTA TTAGAGCTAC GTAACTTGGT ACAAGTTGCA GAATTGATTA TTCGGTGTGC AATGGAACGT AAAGAAAGTC GAGGGCTTCA TTATAATATT GATTATCCTG AACAAATTGA CAATCCTAAA CCAACCATTT TACAACCCAA CCGTTAA
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Protein sequence | MKQAVEHQSD ILVIGSGAAG LTLALHLAEK SKVILLSKGP LSEGSTLYAQ GGIASVFDEG DTIESHVNDT LIAGAGLCDK SVVTYTAENA KSAMQWLINC GVAFDKEETL AGVDNSTAPY HLTREGGHSH RRILHSADAT GKAVQTTLQE RAIAHPNIQV LERYNAIDLI TTRKLHRPGN RVLGAYVWNR DEEHVETVRA KFVALATGGS SKVYQYTSNP DIASGDGIAM AWRAGCRIAN MEFNQFHPTC LFHPNARNFL LTEALRGEGA YLRRPDGSRF MPDFDERAEL APRDIVARAI DYEMKRLGAD CVYLDISHKP ADFIIKHFPT IYQRCLELGI DITKDPIPAV PAAHYTCGGV MTDLHGQTDI NGLYAIGEVA YTGLHGANRL ASNSLLECLV FARAASQDIE GLLHKIPMPC PIPVWDESKV TNSDEEVVIA HNWHELRLFM WDYVGIVRTD KRLERALRRC LMLQQEIEEY YSNFRVSNNL LELRNLVQVA ELIIRCAMER KESRGLHYNI DYPEQIDNPK PTILQPNR
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