| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2931 |
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| Symbol | |
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| ID | 4279836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3519620 |
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| End bp | 3521410 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135751 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_751609 |
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| Protein GI | 114564095 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0135754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACA TTAGAAACTT CTCGATTATT GCCCATATCG ACCATGGTAA ATCAACTTTA
TCCGATCGCC TGATTCAGGT ATGTGGCGGC TTAACTGACC GTGAAATGGC TGCACAGGTT
TTAGATTCAA TGGATCTAGA ACGTGAGCGT GGCATTACGA TTAAAGCCCA AAGTGTCACC
TTAGATTACC ATGCCAAAGA TGGTAACACT TATCTACTCA ACTTCATTGA TACACCCGGC
CACGTTGACT TCTCTTATGA AGTATCACGT TCTTTGGCCG CATGTGAAGG TGCACTATTA
GTAGTTGATG CTGGTCAAGG CGTAGAAGCT CAGACATTAG CAAACTGCTA TACCGCACTA
GAAATGAATT TAGACGTAGT TCCTGTATTA AATAAAATCG ACCTACCTCA GGCTGAACCA
GACCGTGTTG CAGCAGAGAT TGAAGACATT GTTGGCATTG ATGCCATGGA TGCTGTGCGT
TGTTCAGCAA AGACAGGTGT TGGTGTTGAT TTAGTACTAG AGGAAATTAT TGCGAAAATT
CCTCCTCCAG TGGGTGATGA ATCTGCGCCT TTACAAGCGT TGATTATTGA CTCGTGGTTT
GATGCATACC TTGGTGTTGT GTCTTTAGTA CGTATTAAGA ATGGTATTCT TAAAAAAGGT
GAAAAATTTA AAGTGATGTC TACTGGACAG AACTATAACG CGGATCGCGT TGGTATTTTT
ACACCAAAAG AAAAAGATAA AACAGAGCTT CGTGCTGGTG AAGTGGGTTA TGTTATTTCT
GGTATTAAAG AAATTCACGG TGCGCCAGTA GGCGATACCT TAACTCATGC AAAACATGGC
GCAGACAAAC CGCTACCAGG TTTTAAACGT GTTAAGCCTC AGGTTTATGC TGGTGTATTC
CCGATTTCTA CCGATGAATA TGAAAGCTTC CGTGATGCGT TAAATAAATT AAGTTTGAAT
GATGCATCAC TGTTCTTCGA ACCAGAAACG TCATCAGCGT TAGGTTTTGG TTTCCGTATT
GGTTATCTCG GCCTTCTCCA CATGGAGATT GTTCAGGAGC GTTTAGAGCG CGAATATAAT
TTGGATTTGA TTACGACGGC ACCCACAGTG GTGTACGAAG TTATCATGAA CAATGGTGAA
ACGATTTACG TTGATAACCC ATCGGGCTTA CCAGCGCTAA ATAATATCGA AGAAATTCGT
GAACCGATTG TTGAAGCCAA TATATTAGTG CCAAAAGAAT ACTTAGGTAA CGTGATTACC
TTGTGTATTG AAAAGCGTGG CTCGCAAACC AATATGGTTT ATCACGGTAA CCAAGTGGCC
GTGACTTATC ATTTGCCGAT GGCTGAAGTG GTAATGGATT TCTTTGACCG TCTTAAGTCA
ACGAGTCGGG GTTATGCATC ATTAGAGTAT AACTTTATCC GTTTTGATCC TGCAGATATG
GTGCGATTGG ACATTCTAAT CAATGGCGAC AGAGTTGATG CATTAGCGAT GATTATTCAC
CGCAGTAATA TTCGTCATCG TGGTTTGGCA TTGGTTGAAA AGATGAAAGA ACTGATCCCT
CGCCAAATGT TTGATATTGC TATTCAGGCT GCTGTTGGTA GTCAGATTAT TGCTCGTTCA
AGTATTAAAG CATTACGTAA AGATGTAACC GCTAAGTGTT ATGGTGGTGA CGTTTCACGT
AAGAAGAAAC TACTTAACAA GCAGAAAGAA GGTAAAAAAC GCATGAAGCA AGTCGGTAAC
GTTGAAGTGC CACAAGAGGC ATTCTTAGCG GTATTGAAAC TTAACGATTA A
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| Protein sequence | MKHIRNFSII AHIDHGKSTL SDRLIQVCGG LTDREMAAQV LDSMDLERER GITIKAQSVT
LDYHAKDGNT YLLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAL
EMNLDVVPVL NKIDLPQAEP DRVAAEIEDI VGIDAMDAVR CSAKTGVGVD LVLEEIIAKI
PPPVGDESAP LQALIIDSWF DAYLGVVSLV RIKNGILKKG EKFKVMSTGQ NYNADRVGIF
TPKEKDKTEL RAGEVGYVIS GIKEIHGAPV GDTLTHAKHG ADKPLPGFKR VKPQVYAGVF
PISTDEYESF RDALNKLSLN DASLFFEPET SSALGFGFRI GYLGLLHMEI VQERLEREYN
LDLITTAPTV VYEVIMNNGE TIYVDNPSGL PALNNIEEIR EPIVEANILV PKEYLGNVIT
LCIEKRGSQT NMVYHGNQVA VTYHLPMAEV VMDFFDRLKS TSRGYASLEY NFIRFDPADM
VRLDILINGD RVDALAMIIH RSNIRHRGLA LVEKMKELIP RQMFDIAIQA AVGSQIIARS
SIKALRKDVT AKCYGGDVSR KKKLLNKQKE GKKRMKQVGN VEVPQEAFLA VLKLND
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