| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2925 |
|---|
| Symbol | acpS |
|---|
| ID | 4279830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3514573 |
|---|
| End bp | 3514953 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638135745 |
|---|
| Product | 4'-phosphopantetheinyl transferase |
|---|
| Protein accession | YP_751603 |
|---|
| Protein GI | 114564089 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) |
|---|
| TIGRFAM ID | [TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTG TAGGGATCGG AACAGACATT GTTGAGATTG CTCGCATCAG TGAGCAGCGA
GAGCGCCTAG GAGACAGATT AGCTAGGCGA GTACTGACAG AACCTGAGCT TGCTACTTAC
ATGCAATCAA AACAGCCTGA GCGATTTTTA GCTAAACGTT TTGCCGCCAA AGAAGCTGCA
GCAAAAGCCT TAGGCACAGG AATTGGCCGA GGTGTGTCGT TTCAACATAT CCATATCGAC
AATGATGCTA ATGGTGCACC CCAGGTACGT TTTACCGATG GCGCGCTAGC ACGGCTGGAA
CAATTAGCGG GCAAGCATGG TTTTATCAGT ATTGCAGATG AAAAACATTA TGCTGTAGCC
ACTGTGGTGT TAGAAAGTTG A
|
|---|
| Protein sequence | MAIVGIGTDI VEIARISEQR ERLGDRLARR VLTEPELATY MQSKQPERFL AKRFAAKEAA
AKALGTGIGR GVSFQHIHID NDANGAPQVR FTDGALARLE QLAGKHGFIS IADEKHYAVA
TVVLES
|
|---|
| |