Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2921 |
Symbol | |
ID | 4279826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3509804 |
End bp | 3511177 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638135741 |
Product | signal recognition particle protein |
Protein accession | YP_751599 |
Protein GI | 114564085 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00726192 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAA ATTTATCTGA CAGACTTTCA CGCACACTAA AAAACATTAG TGGCCGTGGT CGCTTAACAG AAGACAACAT TAAAGAAACC CTGCGTGAAG TGCGTATGGC GCTGCTTGAG GCGGATGTAG CTTTACCTGT TGTTAGAGAC TTCGTTAACA GCGTAAAAGA ACGCGCTGTG GGTCAAGAGG TGTCAAAAAG CTTAAGCCCA GGGCAAGCGT TTATTAAAAT TGTCCAAAAT GAGCTTGAAA AAGCCATGGG TGAGGCGAAT GAAGCCCTCG ACCTAGCGGC AATACCTCCA GCCGTGATCA TGATGGCGGG TCTTCAAGGC GCGGGTAAAA CAACCTCGGT AGCCAAATTA GGTAAGTTTT TACGCACTCG TCATAAAAAA TCAGTCCTTG TTGTTAGTGC TGACGTATAC CGTCCAGCAG CGATTAAGCA ACTTGAGACA TTGGCTACAG AAGTCGAGGT TGAATTCTTT CCGTCTGACG TGAGCCAAAA GCCTGTTGAT ATTGCTAAAG CAGCAATAAA CTATGCAAAA TTAAAATTCA TTGATGTGGT GATTGTCGAT ACAGCAGGTC GCCTGCACGT TGATGAAGCC ATGATGGATG AAATCAAACA GCTGCATGCA ACTGTCAATC CGGTAGAAAC GTTATTTGTT GTTGATGCGA TGACGGGGCA AGACGCCGCC AATACGGCTA AAGCATTCAA TGAAGCTTTA CCTTTGACGG GTGTTATCTT AACCAAAGTT GATGGTGATG CTCGCGGTGG TGCTGCGTTA TCGATTCGCA GTATCACAGG TAAACCGATT AAATTTTTAG GTGTTGGTGA GAAAACCGAT GCTCTAGAAC CTTTCCATCC AGACCGTATT GCTTCGCGTA TTCTCGGAAT GGGTGATGTG TTGTCTTTAA TTGAAGAAGT TGAACGTGGC GTCGATAAAG ACAAAGCGAT GAAGCTGGCT TCAAAAGTTA AATCTGGCGG CAGTTTCGAC CTAGAAGATT TTCGTGAGCA ATTACAGCAA ATGAAAAACA TGGGCGGAAT GATGAACATG CTTGAGAAGC TTCCTGGTGT GGGACAATTA CCACCAGAAG CATTGGCTCA GGTTCAAGAC GGTAAAATGA CCGGACAAAT GGAAGCCATT ATTAATTCAA TGACGTCTAA AGAACGTAAG AATCCAGATT TGATTAAAGG ATCTCGTAAA CGTAGAATCG CTGGCGGTTC TGGTACCCAA ATTCAAGATG TAAACCGCTT ATTGAAGCAA TTTACCCAAA TGCAGAAAAT GATGAAAAAG ATGTCTGGCA AGGGTGGAAT GAAGAAGATG ATGCGCGGAA TGGGCGGAAT GTTACCACCA GGAATGAAGT TTCCTGGTAG ATAA
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Protein sequence | MFENLSDRLS RTLKNISGRG RLTEDNIKET LREVRMALLE ADVALPVVRD FVNSVKERAV GQEVSKSLSP GQAFIKIVQN ELEKAMGEAN EALDLAAIPP AVIMMAGLQG AGKTTSVAKL GKFLRTRHKK SVLVVSADVY RPAAIKQLET LATEVEVEFF PSDVSQKPVD IAKAAINYAK LKFIDVVIVD TAGRLHVDEA MMDEIKQLHA TVNPVETLFV VDAMTGQDAA NTAKAFNEAL PLTGVILTKV DGDARGGAAL SIRSITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV LSLIEEVERG VDKDKAMKLA SKVKSGGSFD LEDFREQLQQ MKNMGGMMNM LEKLPGVGQL PPEALAQVQD GKMTGQMEAI INSMTSKERK NPDLIKGSRK RRIAGGSGTQ IQDVNRLLKQ FTQMQKMMKK MSGKGGMKKM MRGMGGMLPP GMKFPGR
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