| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2917 |
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| Symbol | rplS |
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| ID | 4279822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3507622 |
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| End bp | 3507975 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135737 |
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| Product | 50S ribosomal protein L19 |
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| Protein accession | YP_751595 |
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| Protein GI | 114564081 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0335] Ribosomal protein L19 |
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| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000537691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACA TCATTAAAAT GCTCAACGAT GAGCAAATGA AAACAGATGT GCCTGATTTT
GGTGCTGGTG ATACAGTAGT AGTTCAAGTA CGTGTTAAAG AAGGCGAAAA AGAACGTCTT
CAGGCTTTTG AAGGTTTGGT AATTGCTAAG CGTAACCGTG GTCTGCATTC AGCATTCACA
GTACGTAAAA TCTCTAATGG CGAAGGTGTT GAGCGTGCTT TCCAGACGCA CAGCCCGCTA
ATTGCTAGCA TCGAAGTTAA GCGTCGCGGT CGTGTACGTC GTGCTAAACT GTACTATTTA
CGTGAGCGTT CAGGTAAGTC TGCACGTATC CGTGAAAAAT TGGCAACTAA GTAA
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| Protein sequence | MNNIIKMLND EQMKTDVPDF GAGDTVVVQV RVKEGEKERL QAFEGLVIAK RNRGLHSAFT
VRKISNGEGV ERAFQTHSPL IASIEVKRRG RVRRAKLYYL RERSGKSARI REKLATK
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