Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2915 |
Symbol | tyrA |
ID | 4279820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3504875 |
End bp | 3506026 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135735 |
Product | bifunctional chorismate mutase/prephenate dehydrogenase |
Protein accession | YP_751593 |
Protein GI | 114564079 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase [COG1605] Chorismate mutase |
TIGRFAM ID | [TIGR01799] chorismate mutase domain of T-protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.449795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAC AGATGAATGA AAAAACCACA GCAGGCTTAG AGCATCTTCG TGATTTAATT GATGGCGTTG ATCAACAATT ACTGCATTTA TTACGTAAAC GTCTCGATTT AGTGGCGCAA GTTGGTGCCG TAAAACATGC GGCTGGTGTA CCTATTTATG CCCCACAGCG TGAAGCATCG ATGTTAGCTA AACGTCGAGA CGAAGCACAA AAAATGAATG TCTCACCACA GTTAATCGAA GATATTTTAC GTCGACTTAT GCGCGAATCT TACCTAAATG AAAAAGATGT TGGGTTTAAG CAGATTAAGC AAGATCTGGG TCATGTGGTC GTTGTGGGTG GTCAGGGCAA ACTGGGACAG TTATTTAGCC AAATGTTGGT TCTTTCTGGT TATGAAGTTA AAAGTATAGA TAAAAATGAT TGGCAAGATG CCGCCGCCAT TTTTGATGGT GCAGGATTAG TGATTGTTAC CGTACCCATA AATGTGACGT GCGAAGTGAT CCGCGACAAG TTAACGCAGC TACCTGAAAA TTGTATTTTA GCTGATCTCA CCTCGATTAA AGAAGCACCT TTAACGGCTA TGTTAGCGGC ACACAAAGGC CCTGTAGTAG GTCTGCATCC TATGTTTGGT CCTGATGTTG GCAGTCTTGC TAAACAGGTG GTGGTAGTGT GTCATGGTCG TCATCAAGAA GCGTATCAAT GGTTACTACA ACAAATTGAA ATTTGGGGGG CTCGTATAGT TGAAGCTGAA GCAGAGCGTC ATGATAAAGC GATGCAGCTA GTGCAGGCTA TGCGTCACTT TTCAACATTC GTGTATGGTG TCAACTTGTG CAAAGAAGAA GCTGATATTG GTAACTTATT ACAGTTTAGT TCACCGATTT ATCGTTTAGA GTTAGCCATG GTCGGTCGTT TATTTGCTCA AGATCCGGAG CTTTATGCCG ATATAATTTT TGCTCAACCA GGTAGTCAAC ACGCTATTAG TGATTATCTT GATAATTATC GTGATGCATT AACAATGTTG CAAACGGGTA ATAGGCAAGC CTTTGTGGAG CAGTTCCAGC GTGTCGCTAA ATGGTTTGGT GATTTTGCGC CGCAGTTCCA ACATGAAAGC CGCGCCATGT TGCAATCTGT TAATGATATG AAAGCTGGAT AG
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Protein sequence | MDKQMNEKTT AGLEHLRDLI DGVDQQLLHL LRKRLDLVAQ VGAVKHAAGV PIYAPQREAS MLAKRRDEAQ KMNVSPQLIE DILRRLMRES YLNEKDVGFK QIKQDLGHVV VVGGQGKLGQ LFSQMLVLSG YEVKSIDKND WQDAAAIFDG AGLVIVTVPI NVTCEVIRDK LTQLPENCIL ADLTSIKEAP LTAMLAAHKG PVVGLHPMFG PDVGSLAKQV VVVCHGRHQE AYQWLLQQIE IWGARIVEAE AERHDKAMQL VQAMRHFSTF VYGVNLCKEE ADIGNLLQFS SPIYRLELAM VGRLFAQDPE LYADIIFAQP GSQHAISDYL DNYRDALTML QTGNRQAFVE QFQRVAKWFG DFAPQFQHES RAMLQSVNDM KAG
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