Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2901 |
Symbol | pgi |
ID | 4279806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3489629 |
End bp | 3491266 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135721 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_751579 |
Protein GI | 114564065 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTACAC TGACACAAAG CACGACTTGG AAGGCGCTAC AAACCCATTC AAGTCAACTA CCTCACATGC GCGAATTATT TGCCCAAAAC CCACAACGTT TTGAGCAAAT GAGCGTTGCG GCTTGTGGTC TGTTTTTAGA TTACTCTAAA AACCGTGTGA ACGATGAAAC ACTTAAGCTG CTATTCTCTC TCGCTAAAGA AGCAAAACTG AGTGAAAAAA TTACTGCAAT GTTTAATGGT GATGTGATTA ACAACACCGA ACAGCGCTCA GTATTGCACA CTGCATTACG CAGTAAAGCA ACTCAAACGA TTATTGCTGA AGGAGCGAAT ATCGTTCCTG AAGTGCAACA AACATTAGCT AAAATGGCTA AGTTTGTTGG CTCAGTGCAA TCAGGCGAGT GGAAAGGTTA TACCGGTAAA GCGATTACAG ATATCGTCAG TATCGGCATT GGAGGTTCAT TTCTTGGACC TAAAATTGTT TCACAAGCGC TTAGACCATA TTGGCAAGAA GGACTTAATT GCCATTTTGT TGCCAACGTA GATGCGACAT CTATTTGTGA AAAATTAAAA AACCTCAATG CTGAGACCAC ATTGTTTGTG ATGTCGTCAA AATCATTCAG TACTCAAGAG ACTCTAACCA ACACCCTTAG CGCTAAAGAT TGGTTTTTAG GCCAGGGTGC AAGCCAACAA GATGTGGCTA AACACTTTGT TGCAGTAACA TCTAATGTAA CAAAAGCCAC TGAGTTTGGT ATGGACGCAA ACAACATATT CCCAATGTGG GATTGGGTTG GCGGACGCTA CTCATTATGG TCAGCCATTG GTTTACCTAT TGCGCTACTT GTTGGTATGG ATAACTTTAC GGCCTTGTTA GATGGCGCGC ATCAAATGGA TCAACATTTT GCTGATACGC CTATCGAACA AAACATGCCA GTCATCATGG CTATGTTGTC AGTATTGTAT GGTAATTTTC ATGGTGCTCA ATCACATGTC ATTTTAACCT ACGATCATTA CTTACGTGGT CTTCCAGCTT ATTTCCAACA ACTCGACATG GAAAGTAATG GTAAATCAGT GACTCTCGAT GGTACTGACG TCGATTACAG CACCGGTCCC GTTATTTGGG GCGGTGAAGG CACTAACGGT CAACATGCAT ACCACCAGTT ACTACATCAA GGCACTGCAC TTATTCCTGC TGACTTTATT ATGCCGCTGC AAAGTCATAA TCCGTTGGGT GAACATCATG ACCAACTTGC ATCAAACTGC TTTGGACAAA CCCAAGCCTT AATGCAAGGT CGTACCTACG ATGAAGCACT TGCTGAGCTA AGTAATAGCA AGCTTGATGA GCAACAAAAG CCGCTTATAG CCAAACATAA AGTAATGGTT GGTAATAAGC CAAGTAATAC CTTATTGATG GATAAGCTAA CGCCAACAAC ATTAGGTGCG TTAATCGCGC TATATGAGCA CAGAACCTTT GTTCAGGGTG CTATATGGCA GATAAACTCA TTTGATCAAT GGGGTGTAGA GCTAGGTAAG CAATTAGGCA ATGATGTGCT TGAACGAATT GGTGCAGACC ACGATGCTAC CGATTTAGAT GGATCGAGCA ATGCATTAGT GAACCTATAC CGTAAAGGTA AGCTATAA
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Protein sequence | MTTLTQSTTW KALQTHSSQL PHMRELFAQN PQRFEQMSVA ACGLFLDYSK NRVNDETLKL LFSLAKEAKL SEKITAMFNG DVINNTEQRS VLHTALRSKA TQTIIAEGAN IVPEVQQTLA KMAKFVGSVQ SGEWKGYTGK AITDIVSIGI GGSFLGPKIV SQALRPYWQE GLNCHFVANV DATSICEKLK NLNAETTLFV MSSKSFSTQE TLTNTLSAKD WFLGQGASQQ DVAKHFVAVT SNVTKATEFG MDANNIFPMW DWVGGRYSLW SAIGLPIALL VGMDNFTALL DGAHQMDQHF ADTPIEQNMP VIMAMLSVLY GNFHGAQSHV ILTYDHYLRG LPAYFQQLDM ESNGKSVTLD GTDVDYSTGP VIWGGEGTNG QHAYHQLLHQ GTALIPADFI MPLQSHNPLG EHHDQLASNC FGQTQALMQG RTYDEALAEL SNSKLDEQQK PLIAKHKVMV GNKPSNTLLM DKLTPTTLGA LIALYEHRTF VQGAIWQINS FDQWGVELGK QLGNDVLERI GADHDATDLD GSSNALVNLY RKGKL
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