Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2900 |
Symbol | |
ID | 4279805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3488660 |
End bp | 3489613 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135720 |
Product | transaldolase B |
Protein accession | YP_751578 |
Protein GI | 114564064 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAATG CACTCGCGCA ACTCAAATCA TTCACGACCA TCGTTGCTGA TACCGGCGAC ATAGAAGCTA TTAAACGTTA CCAGCCTGAA GATGCAACAA CCAACCCATC ACTCATTTTA AAAGCCTCGC AGATCCCTGA ATATGCTTTT CTTATCGAGA ATGCTATCGA ATGGGCTAAA ACCCAAAGCC ACAGTATTGA ACAACAGATT GAAGATGCAG GTGACAAGCT TGCTGTGAAT ATTGGCGTAG AAATTTTAAA GCTAGTGCCA GGTCGTATCT CAACAGAAGT CGATGCTCGC TTATCATTTG ACAAGCAACG CTCAATCGAC AAAGCGCACA AGCTAATCAA ATTATATAAA GATGCCGGAA TTGATAAATC ACGTATTTTG ATCAAATTAG CTTCTACTTG GGAAGGTATT TGCGCAGCAA AAGAACTTGA ACAAGAAGGC ATCAACTGTA ATCTAACATT GCTATTCAGC TTTGCTCAAG CAAGAGCTTG TGCAGAAGCT GGCGTATACC TTATTTCGCC TTTTGTGGGT CGCATCTTAG ATTGGTATAA AAAAGACACC GGTCAAGATT ACACTGCAGA AACCGATCCT GGTGTTGTCT CTGTTACTGA GATTTACAAC TACTACAAGC AGAACGGTTA TAACACAGTT GTTATGGGTG CAAGTTTCAG AAATATCGGT GAGATTATCG AATTAGCCGG TTGTGATCGT CTAACGATTG GACCAGCATT GTTAGAAGAA TTAGCCAATA CTGATGTAGA AATTATCCAG AAATTGGTTG CAACGCCAGC AACACAGTCT GCTCCAGCTG CGTTAACTGA AGAACAATTC CGCTGGGTAT TTAACGAAGA CCCAATGGCA GTTGATAAGT TAGCAGAAGG CATTCGTAAT TTTGCCATCG ATCAAGGCAA ACTAGAAGTT ATGCTAAAAA CAAAATTAAG CTAG
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Protein sequence | MANALAQLKS FTTIVADTGD IEAIKRYQPE DATTNPSLIL KASQIPEYAF LIENAIEWAK TQSHSIEQQI EDAGDKLAVN IGVEILKLVP GRISTEVDAR LSFDKQRSID KAHKLIKLYK DAGIDKSRIL IKLASTWEGI CAAKELEQEG INCNLTLLFS FAQARACAEA GVYLISPFVG RILDWYKKDT GQDYTAETDP GVVSVTEIYN YYKQNGYNTV VMGASFRNIG EIIELAGCDR LTIGPALLEE LANTDVEIIQ KLVATPATQS APAALTEEQF RWVFNEDPMA VDKLAEGIRN FAIDQGKLEV MLKTKLS
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