| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2898 |
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| Symbol | |
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| ID | 4279803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3484483 |
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| End bp | 3486849 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135718 |
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| Product | putative phosphoketolase |
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| Protein accession | YP_751576 |
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| Protein GI | 114564062 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAACT CAAATGAAAT AACTGCACTA AAAAAATACG TACGAGCGAC TAACTTCTTG
GCGACATCGC AAATTTACCT GAAGCAAAAC GTACTTTTTA AGCGTCCTTT ACAACATACT
GACATCAAGC CTCGTTTACT TGGTCACTGG GGAACATGTC CTGGTATCAA CTTTGTTTAC
GCTAACGTCA ACCGTCTTAT TGTTAAGCAT AAGCGTGAAT TCATTTACCT TGTTGGTCCT
GGCCACGGTT TCCCAGCAGT ACAGGCTAAC TTATTTGTAG AAGGTTCATT AAGCCATTTC
TACCCAGAGA CCATACCTTA TACAGAAACG GGTATCGAAG ATATCTGTAA AAAATTCTCA
GCTGCTTATG GTTATCCATC ACATGCAAAC CCTGAAGCAC CAGGTCAAAT ACTAGAAGGT
GGTGAGCTTG GTTATTCACT TTCAGTTGCT TGGGGCTCTG TATTAGATAA CCCAAATCTT
ATTGCCGCCT GTTTAATTGG TGACGGTGAA GCAGAAACAG GTCCATTAGC TGCATCTTGG
TATGCCAACC GTTTAGTCTC ACCAGATAAC AACGGTGCAG TGCTACCAAT CGTACATATT
AACGGTTACA AAATTTCCGG CCCTACTCGT ATGGGTCGTA TGAGCCATGA AGAGCTAGAT
TTAGAATTCC GTGGTCTTGG TTATCACCCA ATCATCGTTG ACGATGAAAT GGAAACCGAT
ATTTTTGAAC AGATGACTGC AGCAATGGAC TTGTCATATG ACATGATCAA TGACATTCAA
CGTCGCGCAC GTTCAGGCGA AGATGTCGTT AAACCACGCT GGCCAGTTAT TTTAATGAGA
ACAGCAAAAG GTTGGACTGG TACCACTGAA TATGATGGCA AAAAACTAGC AGGTAACTGC
GAATCTCATC AAGTTATTGT GAGCAACTGC GCCAAAGATA AAGGCCATCT TGAAGCACTT
GATAAGTGGT TGGCTAGCTA CAAGTTTGAC GAATTAGTGC AAACCACTGA AAGCGGTGAA
TTGATATTTG ATAAAGACAT TATGTCTTTG ATGCCACCAA AAGAATTATG TTGTGGTCGT
CAACGTCTAA GTTACGGCGG TGAAGTGGTA CGTGCTTTAG CAAATCCAGA TTTAAACAAA
TTGGGTTACG GTTCAGAAAC AGCTCGTGGT CAACGTGGTT TCTCAATGTT GAAAATGGGT
GAGTGGATGC GTGATGCATT CAAACTAAAT CGCGATCAAC GTAACTTACG AATCTTCAGC
CCTGATGAAA CATACTCAAA CCAACTACAA GCTGTGTTTG AAGAAACCGA CCGCGCATGG
CAGTGGCCAA TCGAAAGCTG GGACCAAGAT ATGTCTCGCG ATGGCCGCGT GATTGAACTG
CTATCTGAAA ATTTACTTTT CGGTATGCTA CACGGTTACA CAGTAACAGG TCGTCACGGT
ATGTTCCCTA CCTACGAGGC TTTCTCACAA GTAGTGTCAT CAATGGCGGA TCAATACTGT
AAATATGTTC ATGCAAGCCA AGGCATTCAT TTCCGTAAGC CTATCCCTGC ATGTAACGTC
GTATTGTCTT CATTATTAGA ACGTCAAGAT CACAACGGCT ATTCTCACCA GAATCCGTCT
TTCCTAGGCG CTATGTTAGA GAAGCACCCA AACATTATCT CTGCTTATTT ACCAGCAGAT
GCTAACAGCA CCTTGGTTTA CACTGAACGT GCTTATGCTG ATCGCGATAA ACTGAACATT
ATCGTTGCTG GTAAGAAGTC TCTTCCACAG TGGTTATCAC TGGATGAAGC CCGTAAGCAA
GCAAAAGATG GCATCATGGT GTGGGATTTC GCCTCTGATG AAAACCCAGA TGTAGTACTT
GCAGGTTGTG GTGACTATGC AACGCAAGAA TGTATGGCTT CATTGGTATT AATTCGTGAG
ATTTTACCAA GAGTTCGTAT CCGTTTTGTG AGTGTGTCAG AACTTCACAG CAGCGGCCTA
GGTAGCCTTA AGTTCCAAAG CAAGCCTTGG ATGATGGATG AAGTCTTCAC TGAAGATAAA
GGCGTGGTAT TTAACTACCA TGGCTACCCA AACACCATCA AAAAGCTAGT GTTTGATTAT
AAAGGTAACC GTCGCTTCCG CATCAAAGGT TATGAAGAAG AAGGTTCAAC TACAACTCCA
TTTGATATGG GCGTGCGTAA CGGTACTTCT CGTTACCACC TAGTGATTGA TATGGCATAC
AAGTTATTCC AACAAGGCGT AATTGATGAA TCACAACATG TGACCATCAC TACCGACATG
TTACAACGCT TGGTAGACCA TAAAAACTAT ATCAAAGCAA ACGGCGTCGA CCCTGAAGAG
ATCGAAAACT GGGTGTGGAC TCGTTAA
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| Protein sequence | MTNSNEITAL KKYVRATNFL ATSQIYLKQN VLFKRPLQHT DIKPRLLGHW GTCPGINFVY
ANVNRLIVKH KREFIYLVGP GHGFPAVQAN LFVEGSLSHF YPETIPYTET GIEDICKKFS
AAYGYPSHAN PEAPGQILEG GELGYSLSVA WGSVLDNPNL IAACLIGDGE AETGPLAASW
YANRLVSPDN NGAVLPIVHI NGYKISGPTR MGRMSHEELD LEFRGLGYHP IIVDDEMETD
IFEQMTAAMD LSYDMINDIQ RRARSGEDVV KPRWPVILMR TAKGWTGTTE YDGKKLAGNC
ESHQVIVSNC AKDKGHLEAL DKWLASYKFD ELVQTTESGE LIFDKDIMSL MPPKELCCGR
QRLSYGGEVV RALANPDLNK LGYGSETARG QRGFSMLKMG EWMRDAFKLN RDQRNLRIFS
PDETYSNQLQ AVFEETDRAW QWPIESWDQD MSRDGRVIEL LSENLLFGML HGYTVTGRHG
MFPTYEAFSQ VVSSMADQYC KYVHASQGIH FRKPIPACNV VLSSLLERQD HNGYSHQNPS
FLGAMLEKHP NIISAYLPAD ANSTLVYTER AYADRDKLNI IVAGKKSLPQ WLSLDEARKQ
AKDGIMVWDF ASDENPDVVL AGCGDYATQE CMASLVLIRE ILPRVRIRFV SVSELHSSGL
GSLKFQSKPW MMDEVFTEDK GVVFNYHGYP NTIKKLVFDY KGNRRFRIKG YEEEGSTTTP
FDMGVRNGTS RYHLVIDMAY KLFQQGVIDE SQHVTITTDM LQRLVDHKNY IKANGVDPEE
IENWVWTR
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