| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2897 |
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| Symbol | |
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| ID | 4279802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3482523 |
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| End bp | 3483965 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135717 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_751575 |
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| Protein GI | 114564061 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATGT TAGAAACGAT TATTAATTTC ATGAATAGCC TGCTTTGGGG CAAGCTATTA
GTTTATGGGC TGGTAGGTGC GGGATTATTT TTCACCATTC GTCTCGGTTT TATTCAAGTC
ACTCACTTTG TTCATGGCAT TAAAGTATTG GCTATTAGCC GTCGCCCAGG TAAGCATGGC
TTATCATCAT TTCAAGTTTT TTGTACTAGC ATGGCTGCGC GTGTAGGCGC CGGTAATATG
GCCGGTGTGG CCGTTGCTAT TGGTACAGCA GGACCCGGTG CTGTGTTCTG GATGTGGGCT
ATTGCGGTTC TCGGTATGGC AACCGCAATG ATTGAGTCGA CACTTGCGCA AGTCTATAAA
GTGAAAGATG GTGATGGTCA GTACCGAGGT GGGCCTGCTT ATTATATGGA GAAAGGTCTC
GGTCAACGTT GGATGGGCGT GCTTTTCTCA ATCTTTTTAA TTCTAGCTTT TGGTTTAGTA
TTTAATGCTG TTCAAGCTAA CACTATAACT GGTGCGATGA CGCAAGTGTT TGGCTTTGAG
CCCGTCTATG TTGGAATCGG CATTGTTATT TGCAGTGCCT TTGTCATCGT AGGAGGCCTT
AAGAAGGTTG CTAAAGCGTC TGAGTTAATT GTGCCTGTGA TGGCTATTGC TTATATTGCT
ATTGCTTTTG TCGTTGTGGG TATGAATATT GAAAAGTTAC CCGACATATT CATGTTAGTT
ATTAACAGTG CATTTGGTTG GCAAGAAGCC GCTGCAGGTG GTGTTGCATT TAGTGTTTCA
CAAGCAATGC AAGCTGGTAT TGCCCGAGGA TTGTTTTCAA ACGAAGCAGG TATGGGAAGT
GCCGCTAACG TTGCGGCAAG TGCATCACCA AACCCTAACC ACCCAGCATC GCAAGGTTTT
GTGCAAATGA TGGGCGTGTT TGTTGATACA ATTGTTATTT GTACCGCAAC AGCAGCGATT
ATTTTATTAT CCGGTGATGC AGCCTCTAGC TCTGATGGTA TTGCTAAAAC TATTAGTGCA
TTAACCAGTC ATGTAGGTGA TTGGGGCGGG GCATTTATTG CTTTTGCTAT TTTACTCTTT
TGCTTTACGT CTATTATTGC CAACTATTCA TATGCCGAAA CTAATGTCAT GTTCTTGTCA
GGCAATAGTA AAAAAGCCTT ACCTATATTC CGTTTAGTGG TTTTGGGTAT GGTGATGTTT
GGTTCTCTTG CTAAAATTAG TTTGGTTTGG GATTTAGCTG ATGTGTCGAT GGGGCTAATG
GCCATTGTTA ACTTAGTGGC ATTAGTCTTG TTGTCTGGTC TAGCGGTTAG AGTGATTAAT
GATTACCGTG AACAGATAGA CGCCGGTATT GATCCGGTAT TTGACACCAG TAAGTTTCCG
GAATTAGCCG ATCAATTAGA AGAAAAAATT TGGCCTAACT CAGCAGAGCC GGTCAAAAAA
TAA
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| Protein sequence | MAMLETIINF MNSLLWGKLL VYGLVGAGLF FTIRLGFIQV THFVHGIKVL AISRRPGKHG
LSSFQVFCTS MAARVGAGNM AGVAVAIGTA GPGAVFWMWA IAVLGMATAM IESTLAQVYK
VKDGDGQYRG GPAYYMEKGL GQRWMGVLFS IFLILAFGLV FNAVQANTIT GAMTQVFGFE
PVYVGIGIVI CSAFVIVGGL KKVAKASELI VPVMAIAYIA IAFVVVGMNI EKLPDIFMLV
INSAFGWQEA AAGGVAFSVS QAMQAGIARG LFSNEAGMGS AANVAASASP NPNHPASQGF
VQMMGVFVDT IVICTATAAI ILLSGDAASS SDGIAKTISA LTSHVGDWGG AFIAFAILLF
CFTSIIANYS YAETNVMFLS GNSKKALPIF RLVVLGMVMF GSLAKISLVW DLADVSMGLM
AIVNLVALVL LSGLAVRVIN DYREQIDAGI DPVFDTSKFP ELADQLEEKI WPNSAEPVKK
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