| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2896 |
|---|
| Symbol | |
|---|
| ID | 4279801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3481645 |
|---|
| End bp | 3482421 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638135716 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_751574 |
|---|
| Protein GI | 114564060 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.423093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTTT TAGTTTCACC TGCGAAAACA TTAGATTTCG AAAATCCACC TATCACTAAT
ACCCATACTC AACCGTGTTT ACTTAAACAA AGCCAAACAT TGATTGATGT ATGCCGTGAA
TTAACACCAA TGGATATTGC CAGTTTAATG AAAGTAAGCG ATAAAATTGC CGGACTGAAT
GCTGCGCGTT TTGCTGACTG GCAACCACCG TTTACCCTTG ATAATGCCAA ACAGGCTATT
TTCGCGTTTC GAGGCGATGT CTACACAGGA TTTGATGCCG ATCATTTATC TGAATCACAA
ATGGCTTCTA GTCAAAAGCA TTTGCGTATT TTGTCTGGTT TGTATGGTTT GCTTAAACCA
TTAGATTTAA TTCAACCGTA CCGGTTAGAA ATGGGTACTA AACTGACAAA CCCACAGGGC
CGTAACTTAT ATGCTTTTTG GGGCGAGACT ATCACTGCTG AAGTGAATAA GGCGTTGAAA
GAGCAGGGTG ACGATATCAT TGTCAATTTA GCCTCGAATG AATACTTCAA ATCGGTCAAC
GTTAAGCAAC TTGAAGGACA GTTGATTACG CCAGTCTTTA AAGACTGCAA AAAAGGTCAG
TTTAAAGTGA TTAGCTTTTA CGCCAAAAAA GCGCGTGGAT TGATGGCTCG TTATATAGTT
GATACTAAAC CTACCAGTGT TGAACAATTA ACAGCATTCG ATCTTGAAGG TTATTATTAT
AACGAAGCGC AATCGACACC CACAGCGCCA GTATTTTTAC GAGACGAACA AAAGTAA
|
|---|
| Protein sequence | MLVLVSPAKT LDFENPPITN THTQPCLLKQ SQTLIDVCRE LTPMDIASLM KVSDKIAGLN
AARFADWQPP FTLDNAKQAI FAFRGDVYTG FDADHLSESQ MASSQKHLRI LSGLYGLLKP
LDLIQPYRLE MGTKLTNPQG RNLYAFWGET ITAEVNKALK EQGDDIIVNL ASNEYFKSVN
VKQLEGQLIT PVFKDCKKGQ FKVISFYAKK ARGLMARYIV DTKPTSVEQL TAFDLEGYYY
NEAQSTPTAP VFLRDEQK
|
|---|
| |