| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2894 |
|---|
| Symbol | |
|---|
| ID | 4279799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3479679 |
|---|
| End bp | 3479975 |
|---|
| Gene Length | 297 bp |
|---|
| Protein Length | 98 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638135714 |
|---|
| Product | transcriptional regulator, ArsR family protein |
|---|
| Protein accession | YP_751572 |
|---|
| Protein GI | 114564058 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0578791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAG AAAAAATGCA GCAGCAAGCA GATCATGCGG TCGTATTGCT AAAAGCATTA
GCAAATGAAC GTAGATTGTT TATTTTGTGT CATCTTCTTA ATGAAGGTGA AATGTGTGTT
GGTGAAATGA ATAAAAAGTT GGGTTTGAGT CAATCGGCTT TATCTCAACA TTTGGCATGG
CTTCGTAAAG ACAATCTAGT CTGTACCAGG AAAGAAGCAC AAACCGTTTT TTATTCATTA
AAAAGTAATG AGGTAAAAGA GTTAATTCAA GTATTAAATA ATATGTATTG TTATTAA
|
|---|
| Protein sequence | MNIEKMQQQA DHAVVLLKAL ANERRLFILC HLLNEGEMCV GEMNKKLGLS QSALSQHLAW
LRKDNLVCTR KEAQTVFYSL KSNEVKELIQ VLNNMYCY
|
|---|
| |