| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2892 |
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| Symbol | |
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| ID | 4279797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3476919 |
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| End bp | 3478493 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135712 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_751570 |
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| Protein GI | 114564056 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.620395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCGGGG GCTGTTTGAG CAAAAAATTA TTTAAATCAG GCTTAATTGT TAGTGTTATG
ACGCTGATGT CTCGAGTGTT AGGTTTAGTG CGTGATGTGG TGATAGCAAA TCTAATGGGA
GCAGGCAGCA GTGCTGATGT GTTCTTTTTT GCAAATAAAA TACCTAACTT CTTAAGGCGT
TTATTTGCTG AAGGTGCTTT TGCGCAGGCA TTTGTGCCGG TACTGACTGA GTACCAAGAA
AAAATGACCC CAGAAGATAC TCGCGAGTTA TTAAGTAAAG TCGCTGGTAC TTTAGGTGTA
CTGGTGACAA TTGTTACTTT GGTTGGTGTT ATTGGTTCTC CGGTATTAGC AGCCCTTTTT
GGTGGCGGCT GGTTTGTTGA TTGGTTAAAT GATGGGCCGA ATGCTGAAAA GTTTGAACTG
GCTTCAGTGA TGTTAAAAAT TACCTTCCCA TATTTATGGT TTATCACTTT CACAGCCCTA
GCAGGATCGA TACTTAATAC TCGCGGGCGC TTTGCGGTTT CAGCCTTTAC GCCGGTATTT
TTGAATGTTG CGATTATTGC TGTGGCTTTA TGGTATGCAC ATACACTTGA AAACCCGGAA
ATTGGTTTGG CTTGGGGTGT GTTTTTTGGT GGACTGATTC AGTTTCTATT CCAAATACCT
TTCTTAATTC GTGAGAAAGC ACTCGTTAGG CCTACGTGGG GATGGAATCA CCCAGGGGTG
GTAAAAATTA GGACCTTAAT GATCCCTGCG TTATTTGGTG TGTCTGTTTC ACAAATTAAT
TTATTGTTCG ACACTTTTAT AGCCAGTTTC CTGATGACGG GATCGATAAG TTGGCTGTAT
TACGCTGACC GCCTATTGGA GTTCCCTTTA GGATTATTTG GCATTGCCAT TGCGACGGTA
ATTTTGCCTG CATTATCGCA AAAGCATGTT AATGCCCAAG GCAGTGGCTT TAATCAAACT
ATGGACTGGG GAGTTAAAGC CATTTTACTG TTAGGCACTC CAGCTATGTT AGGACTGATT
ATTCTCGCTA AACCAATGCT GATGGTGTTG TTTATGCGTG GCGCATTTAG CTTAAATGAC
GTTGAAATGG CTTCGTATAG TTTGGTTGCT TATGGCTGCG GTTTATTAAG TTTCATGATG
ATTAAAGTAT TAGCTCCTGG ATACTATTCG CGCCAAGACA CTAAAACTCC GGTTAAATAT
GGCATTATTG CCATGGTCAG CAATATGGTG TTCAACCTTA TCTTTGCCAT TCCATTTGGC
TACGTGGGTT TAGCCATCGC GACATCAATG TCTGCGCTAT TAAATGCGGG TTTATTATAT
CGAGGTTTGC ATAAAGCGGG CGTCTATCAA ATGAGCCGAC AGACGTTATT TTTCTCGTTT
AAAGTCATCA TTTCTACCAC CTTAATGGCC ATTGGCATTG TTTATTTTAT GCCGCAACAA
AGTATATGGC TCGAATGGCA GACCTTTGAA CGTATGTTTA TGTTGATTGA GCTAATTGTT
GGTGGCGCGG TTATTTATTT ATTAAGTTTA CTTGCATTGG GTGTACGGCC TTGGAAAATT
AAACGTCAGG GATAA
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| Protein sequence | MSGGCLSKKL FKSGLIVSVM TLMSRVLGLV RDVVIANLMG AGSSADVFFF ANKIPNFLRR
LFAEGAFAQA FVPVLTEYQE KMTPEDTREL LSKVAGTLGV LVTIVTLVGV IGSPVLAALF
GGGWFVDWLN DGPNAEKFEL ASVMLKITFP YLWFITFTAL AGSILNTRGR FAVSAFTPVF
LNVAIIAVAL WYAHTLENPE IGLAWGVFFG GLIQFLFQIP FLIREKALVR PTWGWNHPGV
VKIRTLMIPA LFGVSVSQIN LLFDTFIASF LMTGSISWLY YADRLLEFPL GLFGIAIATV
ILPALSQKHV NAQGSGFNQT MDWGVKAILL LGTPAMLGLI ILAKPMLMVL FMRGAFSLND
VEMASYSLVA YGCGLLSFMM IKVLAPGYYS RQDTKTPVKY GIIAMVSNMV FNLIFAIPFG
YVGLAIATSM SALLNAGLLY RGLHKAGVYQ MSRQTLFFSF KVIISTTLMA IGIVYFMPQQ
SIWLEWQTFE RMFMLIELIV GGAVIYLLSL LALGVRPWKI KRQG
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