| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2891 |
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| Symbol | |
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| ID | 4279796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3475847 |
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| End bp | 3476782 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135711 |
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| Product | riboflavin biosynthesis protein RibF |
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| Protein accession | YP_751569 |
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| Protein GI | 114564055 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0196] FAD synthase |
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| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.831946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAA TCCGCGGTAT ACACAATATT TTACCTTCTC ATCATGGTTG CGTTTTGACC
ATTGGGAATT TTGATGGTGT CCATCGTGGC CATGCACAGG TGATCAGCAG CTTAGTGAGT
AAAGCGCATC ATTTTCAACT GCCTGCAATG TTAATGACCT TTGAACCGCA ACCGCAAGAA
CGTTTTCGTG GTACTGATGC GCCAGCGCGG CTTAGTCTTC TACGCGATAA AATTAGATTG
TTAGATGAGC TTAAAATTGA TCAGCTACTT TGCATCAACT TTACTGAAGC CTTTGCTAAT
CAACCTGCTG AAGCGTTTAT TGAAGAGTTA TTGGTTAAAA AGCTCGGCGT TAAATATCTC
GTAGTTGGAG ATGATTTTTG TTTTGGTAAA GGTCGCTTAG GCAACTTCGA TATGCTCGTT
GCTGCGGGTA AAGAATTTGG CTTTACTGTA GTCAGTACAC AAAGCTTTGT TGTTGGTTCG
TTGCGAGTAA GCTCTACAGC AGTGAGAGAA CAGCTGGCGT TAGGACACTT AGAACAAGCA
AGACGTTTAT TGGGTCATCC TTTCATTTTA AGTGGTAAGG TTGCTCACGG ACAAAAATTA
GGCCGTACAA TCGGTTTTCC AACAGCAAAT ATTGCCTTAA AACGACACGT TGTACCTGTC
AGAGGGGTAT TCGCGGTTCG CTTGTACTGG GATGGCAGCG ATATTTATGA TGGTGTGGCT
AATGTGGGTT TTAGACCCAC TGTAAATGGT CAAACTTGCA GATTAGAAGT CCATTTGTTT
GATTTTAGCG GTGATTTATA CGGCAAACGA GTGGAAGTGG AATTAGTAGC AAAGATCCGT
GATGAACAAC CTTTTGAGTC ATTGGACGCG CTAAAAAAAC AGATTTTAAA TGATGCAAAT
GAAGCTCGCG CTTTATTTAG CAACGATGCT AGCTGA
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| Protein sequence | MELIRGIHNI LPSHHGCVLT IGNFDGVHRG HAQVISSLVS KAHHFQLPAM LMTFEPQPQE
RFRGTDAPAR LSLLRDKIRL LDELKIDQLL CINFTEAFAN QPAEAFIEEL LVKKLGVKYL
VVGDDFCFGK GRLGNFDMLV AAGKEFGFTV VSTQSFVVGS LRVSSTAVRE QLALGHLEQA
RRLLGHPFIL SGKVAHGQKL GRTIGFPTAN IALKRHVVPV RGVFAVRLYW DGSDIYDGVA
NVGFRPTVNG QTCRLEVHLF DFSGDLYGKR VEVELVAKIR DEQPFESLDA LKKQILNDAN
EARALFSNDA S
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