| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2890 |
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| Symbol | ileS |
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| ID | 4279795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3472991 |
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| End bp | 3475822 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135710 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_751568 |
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| Protein GI | 114564054 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.063725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATCAA TGAGCGACTA TAAATTTACT TTGAATTTGC CGGAAACAGA GTTTCCGATG
CGCGGTAATT TGGCAAATCG CGAGCCAGAA ATGTTAAATA GCTGGACGCA AGACGGGCTG
TATCAGCAGA TCCGTGAAAG CCGTACTGGC CGTAAACCTT TCATTCTTCA TGATGGCCCT
CCATACGCCA ATGGCAGCAT TCATATAGGT CATTCGGTAA ACAAAATTCT TAAAGACATC
ATTATTAAGT CTAAAACCAT GTCAGGTTTT GACGCGCCTT ATATTCCAGG CTGGGATTGT
CATGGATTAC CGATTGAGCT TAAAGTTGAG CAAAAAGTCG GTAAGCCAGG CGTTAAAATT
TCTGCGGCAG AGTTCCGTGA AGAATGCCGT AAATATGCGG CTATTCAAGT TGATGGTCAA
CGAGAAGACT TTATCCGTTT AGGTGTATTA GGTGATTGGC AAAATCCTTA CCTAACAATG
GATTTTTCAA CCGAAGCGAA TATTGTCCGT TCATTGGCAA AAGTGATTGA AAGTGGTCAT
TTGCACAAAG GTGTTAAACC TGTGCATTGG TGTACCGACT GTGGTTCAGC ACTTGCTGAG
GCAGAAGTAG AATACGAAGA TAAAACATCT CCTGCCATCG ATGTGGCTTT TTTTGCAGTT
GATAGCTCAG CTGTTGCCGC TAAATTTGGC GTTGAGAATT ATACTAAACC GGTAGCGATG
GCAATTTGGA CTACCACGCC GTGGACCATG CCTGCTAACC GCGCACTATC ACTGAGTCCT
GAGCTAGATT ATAGCTTGGT TGAATTTGTG AAAGAGGGTA AAACCACCAC CTTGATATTA
GCTCAAGTTC TGGTTGAGTC ATGTCTTGAG CGTTATGGCG CGGAGTCGCA CACTATTTTA
GGCGAAGTGA AAGGCGCCGA GCTTGAGTTA ATGCGCTTTA ATCATCCATT CTATGCTTTT
GATGTGCCAG CTATTTTAGG CGACCATGTT ACGACTGATG CAGGTACCGG TATTGTTCAT
ACTGCACCGG GCCACGGTCA GGACGACTTT GTTGTTGGTC AAAAGTACGG TTTAGAAGTG
GCTAACCCTG TTGGCGACAA TGGTGTTTAT AAGCCAGACA CTGAATTTTT TGCTGGCCAA
CACGTTTTTA AAGCTAACGC CAACGTGGTT GCGCTGTTAG AAGAAAAGGG CGCACTACTA
CTGCATGTTG CTATCCGCCA TAGCTATCCG CATTGCTGGC GCCACAAAAC GCCAATTATT
TTCCGTGCAA CGCCACAATG GTTTATCTCT ATGGATAACC ATGGCTTGCG TTCACAAGCG
TTAAAAGAAA TCGAACAAAC CAAGTGGATC CCAGATTGGG GCCAAAGCCG AATTGAAAAA
ATGGTTGAAA ACCGTCCAGA CTGGTGTATT TCACGTCAGC GTACGTGGGG CGTACCGATT
ACGTTATTTG TTCATCGTGA AACGGATGAG TTACATCCAG ACAGTGTTTC ATTGATGGAA
CGCGTAGCGC ATCGCATTGA ACAACAAGGC ATCCAAGCTT GGTGGGATTT AGAGGCAAGT
GAATTGTTAG GTGATGAGGC AGATCAGTAC CGTAAAGTGA CAGATACTTT AGACGTATGG
TATGACTCCG GTTCATCATT TTCATCAGTG GTTGCAGCGC GTCCAGAGTT TCATGGACAT
GACATTGATT TGTACCTAGA AGGAAGCGAT CAGCATCGTG GTTGGTTTAT GTCATCATTG
ATGATTTCAA CCGCTATGAA TGGTAAAGCA CCTTATAAGC AAGTATTGAC GCATGGTTTT
ACCGTTGATG GTAAAGGCCG CAAGATGTCA AAATCTGTTG GTAACGTGAT TGCTCCATTA
CAAGTAATCA ATAAGCTTGG TGCTGACATT TTACGTCTAT GGGTTGCAGC AACGGATTAT
AGTGGCGAAA TGACCGTATC TGACGAGATT TTAAATCGTA GTGCTGATGC ATATCGTCGT
ATTCGTAATA CTGCGCGTTT CTTGCTTGCT AACTTGAATG GCTTTAACCC AGAAACGGAC
ATGATCGCAT CTGAAGACAT GGTCGCGTTA GATCGTTGGG TTGTTCGTCG TGCAGCAGTG
CTGCAACAAG AAATCATCGA AGCGTACGAT CAATATAATT TCCATTTAGT GACTCAAAAG
CTCATGCAGT TCTGTTCTGT AGAGTTAGGC AGTTTCTATC TTGATATTAT TAAAGATCGC
CAGTACACCG CTAAGCAAGA AGGGCATGCA CGTCGTAGCT GTCAATCTGC GCTTTATCAT
ATTGCCGAGG CGATGGTTCG CTGGATGACG CCAATTTTAA GCTTTACCGC TGATGAAGTG
TGGCAATTAT TACCAGGTAA ACGTGAAAAG TATGTGTTTA CCCAAGAATG GTATCAAGGC
TTAGAAGCCG TCACTCTTGA AAGTGATTTA AGCGATGATT ATTGGGAGAA ACTATTAACT
GTTCGTAATG AAGTTAACAA AGTACTCGAA CAAGCGCGTC GTGATAAACG TATTGGTGGT
TCACTAGAAG CTGAAGTGAC ATTGTTCGCT GATGCCGATT TAGCGGCTGA GTTAGCTAAA
GTCGGTGATG AGTTACGATT TATCCTTATT ACCTCTAAAG CAGCTGTTGC GGATATGTCA
CAAGCCGGTA GCGATGCCAT CGAAACTGAA CTAAGTTCGC TTAAACTAGT GGTTGCCAAA
AGTAGCGCCG AGAAGTGTGA GCGTTGCTGG CACTATCGTG AAGAGGTTGG CACCATTGAA
GCTCACCCAA CATTGTGTCA ACGCTGTGTG ACCAATATTG AAGGTGAAGG CGAACAACGC
GAATTCGCTT AA
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| Protein sequence | MGSMSDYKFT LNLPETEFPM RGNLANREPE MLNSWTQDGL YQQIRESRTG RKPFILHDGP
PYANGSIHIG HSVNKILKDI IIKSKTMSGF DAPYIPGWDC HGLPIELKVE QKVGKPGVKI
SAAEFREECR KYAAIQVDGQ REDFIRLGVL GDWQNPYLTM DFSTEANIVR SLAKVIESGH
LHKGVKPVHW CTDCGSALAE AEVEYEDKTS PAIDVAFFAV DSSAVAAKFG VENYTKPVAM
AIWTTTPWTM PANRALSLSP ELDYSLVEFV KEGKTTTLIL AQVLVESCLE RYGAESHTIL
GEVKGAELEL MRFNHPFYAF DVPAILGDHV TTDAGTGIVH TAPGHGQDDF VVGQKYGLEV
ANPVGDNGVY KPDTEFFAGQ HVFKANANVV ALLEEKGALL LHVAIRHSYP HCWRHKTPII
FRATPQWFIS MDNHGLRSQA LKEIEQTKWI PDWGQSRIEK MVENRPDWCI SRQRTWGVPI
TLFVHRETDE LHPDSVSLME RVAHRIEQQG IQAWWDLEAS ELLGDEADQY RKVTDTLDVW
YDSGSSFSSV VAARPEFHGH DIDLYLEGSD QHRGWFMSSL MISTAMNGKA PYKQVLTHGF
TVDGKGRKMS KSVGNVIAPL QVINKLGADI LRLWVAATDY SGEMTVSDEI LNRSADAYRR
IRNTARFLLA NLNGFNPETD MIASEDMVAL DRWVVRRAAV LQQEIIEAYD QYNFHLVTQK
LMQFCSVELG SFYLDIIKDR QYTAKQEGHA RRSCQSALYH IAEAMVRWMT PILSFTADEV
WQLLPGKREK YVFTQEWYQG LEAVTLESDL SDDYWEKLLT VRNEVNKVLE QARRDKRIGG
SLEAEVTLFA DADLAAELAK VGDELRFILI TSKAAVADMS QAGSDAIETE LSSLKLVVAK
SSAEKCERCW HYREEVGTIE AHPTLCQRCV TNIEGEGEQR EFA
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