| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2879 |
|---|
| Symbol | |
|---|
| ID | 4279784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3462356 |
|---|
| End bp | 3462694 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638135699 |
|---|
| Product | nitrogen regulatory protein P-II |
|---|
| Protein accession | YP_751557 |
|---|
| Protein GI | 114564043 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0347] Nitrogen regulatory protein PII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TCGAAGCGAT TATTAAACCG TTTAAACTTG ATGATGTGCG TGAGTCACTT
GCTGAAATTG GCATTACTGG TATGACAGTA TCAGAGGTTA AAGGCTTTGG ACGTCAGAAA
GGTCACACAG AGCTTTATCG TGGTGCAGAA TATATGGTTG ATTTTTTACC TAAGGTAAAA
ATTGAATTAG TAATCCAAGA TGACATTCTG GAACGTGCGA TTGATGTTAT CGTTGATATA
GCCAGAACAG GTAAAATTGG TGACGGTAAA ATATTTGTAA CTGATATTGA ACGCGTGATT
CGTATTCGTA CCGGCGAAGA AAATGAAGAA GCAGTATAA
|
|---|
| Protein sequence | MKKVEAIIKP FKLDDVRESL AEIGITGMTV SEVKGFGRQK GHTELYRGAE YMVDFLPKVK
IELVIQDDIL ERAIDVIVDI ARTGKIGDGK IFVTDIERVI RIRTGEENEE AV
|
|---|
| |