Gene Sfri_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2875 
Symbol 
ID4279780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3457532 
End bp3458107 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content39% 
IMG OID638135693 
Producthypothetical protein 
Protein accessionYP_751553 
Protein GI114564039 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.367031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC ACCTTATAGC AGCAGTAATC GGTGCAACGT TTATGTTACC TGTTGCTGTT 
AATGCTGCCG ACTATGTTAT CGACACTCAA GGTGCACATG CATCGATTCA ATTTAGTGTA 
AGCCATTTGG GTTATAGCTT TGTAGTGGGG CGCTTTAATG AGTTTTCTGG CGACTTCAGT 
TTTGATGCTG ACAAAGTCGC AGATGCTAAA GTGAATGTTA AAATTAATAC TAACAGTGTT 
GATTCTAATC ATGCCGAGCG AGACAAGCAT TTACGCAGCG CAGACTTTTT AAATACCAGT 
AAATTTCCAG AAGCCTCTTT TTCATCAACA TCAATTGTTG ATAAAGGAAA TAACCAGTTT 
GTAATTAATG GTGACTTTAC TTTAAATGGT GTGACTAAGC CGTTAAGCAT TGATGCCGTT 
GCTATTGGTG AAGGTAAAGA TCCATGGGGT GGATACCGTG CAGGCTTTAG TGGCAAAACC 
ACTTTTGCAA TGAAAGATTT TGGTGTCAAA ATGGATTTAG GTCCAGCTTC TGCAAACGTT 
GAATTAGCAT TAGTTGTGGA AGGCGTTAAA CAATAA
 
Protein sequence
MKKHLIAAVI GATFMLPVAV NAADYVIDTQ GAHASIQFSV SHLGYSFVVG RFNEFSGDFS 
FDADKVADAK VNVKINTNSV DSNHAERDKH LRSADFLNTS KFPEASFSST SIVDKGNNQF 
VINGDFTLNG VTKPLSIDAV AIGEGKDPWG GYRAGFSGKT TFAMKDFGVK MDLGPASANV 
ELALVVEGVK Q