| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2868 |
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| Symbol | |
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| ID | 4279773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3451414 |
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| End bp | 3452355 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135686 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_751546 |
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| Protein GI | 114564032 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0376307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAC TGTTAGAACC TATCGCAATT TTTACTCATG TTGCACGTGC AGGAAGTTTT
AGTGCTGCAG CCAGACGTCT TGGCATTTCT AAATCTAAAG TAAGTACTCA AGTTGCAGAT
CTTGAACATA AACTTGGCGT GCAGCTTATT CAGCGAACAA CCCGCAGTTT AAGCCTTACT
GAAGCCGGCA ATTTATTGTA TCTCCAAGGC GAAGAGCTCC TTCGTGATGC AGAGCAGGCA
GTTTCAAGTG TTCACAATTT AAATGATGCA ACTCGTGGTG TATTAAAAGT TGGGATATCG
CAATCATTTG GCACCATGCA TATTATTCCT GCTTTACCAG CATTTATGGC AAGACATCCA
GAGCTTGAAC TACAAGTTAG CTTACTTGAT CATAAGGTCG ATGTTGTCAG TGAAGGCTTA
GATCTACTGT TAACCATGTC TGAGCAATTG CCGCTGGGTA TGGTGGCAAG ACCGTTAATG
AAATGTCAGT TCTTATTAGT CGCCTCACCG GGTTATATTG CGCAACATGG TAACATTAGC
CGACCTGAAC AGTTAGTTGA GCACAATTGC TTGGTGTATC AAGGCGAGTG GCATGAGCAC
AGTATGTGGC AATTTAAAAA GGGCGAAGAC TATTGCGAAA TTGGTGTGTC AGGCAATTTC
CGTGTCGATA ATGCACCAGC ATTGAAATCG GCCGCAGTGA GTGGTTTAGG CATTGTATAT
TTAGCCAGTT ACTTAATGGA AGATGAAATC GCTCAAGGGA CATTGGTACC TTTGTTACCT
GATTGGCAGT TGACTCACAA CCTTCCATTA CAAGCTGTGT ATCCTCGTCG TAAGCATCTA
GCTCCCAAAG TCAGTGCGTT TATTGATTTT ATTAAAACGC ACATTAGTAG CCCACCTTAT
TGGGATGCTA AGTTCGACCA TTTGTATAAA CTTCGTAAGT AA
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| Protein sequence | MLELLEPIAI FTHVARAGSF SAAARRLGIS KSKVSTQVAD LEHKLGVQLI QRTTRSLSLT
EAGNLLYLQG EELLRDAEQA VSSVHNLNDA TRGVLKVGIS QSFGTMHIIP ALPAFMARHP
ELELQVSLLD HKVDVVSEGL DLLLTMSEQL PLGMVARPLM KCQFLLVASP GYIAQHGNIS
RPEQLVEHNC LVYQGEWHEH SMWQFKKGED YCEIGVSGNF RVDNAPALKS AAVSGLGIVY
LASYLMEDEI AQGTLVPLLP DWQLTHNLPL QAVYPRRKHL APKVSAFIDF IKTHISSPPY
WDAKFDHLYK LRK
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