| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2865 |
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| Symbol | |
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| ID | 4279770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3447083 |
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| End bp | 3447757 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135683 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | YP_751543 |
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| Protein GI | 114564029 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0177844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGCAA ATTTACCCTC ATCTAAAAAA CTTATGCATA CCTTAGCCAA ACAACAAATT
GTTCTTGCCA GTGGCAACAA AGGCAAACTT GCCGAATTTG ATCAAATGCT GACAGCATTT
AATATTGAAG TATTACCACA GAATCAATTT AACGTGACAG AGGTTGCAGA GACAGGCACT
ACATTTGTAG AAAACGCCAT TATTAAAGCT CGCCATGCCG CTGAAATAAC GGGTAAGGCT
GCAATTGCAG ATGACTCAGG CATTGAAGTT GATGCACTAC AAGGCCAACC AGGGATTTAC
TCGGCACGCT ATTCTGGTCC TGGTGCAACT GAAACTAGCA ACTACCTCAA GCTACTTGAT
GCATTGCAAG GTGAAACACT TCGAAGTGCC CGTTTCCAAT GTGTACTTGT GTATATGCGT
CACGCAAAAG ATCCCACGCC AATAATTTGC CAGGCTTCAT GGGAAGGAAC AATAAACCAT
GTCCCACAAG GCGAACAAGG CCATGGATAT GACCCAGTGT TTATTCCACA AGGTTTTGAT
TGCTCGGCAG CTGAGTTAAC TCGTGAGCAG AAAAATGCCC ATAGTCATCG AGGCAAAGCA
CTTGAGTTAT TAGTGAGTGC CATGAAAGCC CAAGGTATTA TTTTATCGAA CAATACTTCT
GGCGGTCATC AATAA
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| Protein sequence | MTANLPSSKK LMHTLAKQQI VLASGNKGKL AEFDQMLTAF NIEVLPQNQF NVTEVAETGT
TFVENAIIKA RHAAEITGKA AIADDSGIEV DALQGQPGIY SARYSGPGAT ETSNYLKLLD
ALQGETLRSA RFQCVLVYMR HAKDPTPIIC QASWEGTINH VPQGEQGHGY DPVFIPQGFD
CSAAELTREQ KNAHSHRGKA LELLVSAMKA QGIILSNNTS GGHQ
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