| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2843 |
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| Symbol | |
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| ID | 4279748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3424583 |
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| End bp | 3427315 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135661 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_751521 |
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| Protein GI | 114564007 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.427616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTACATA AAACCAAAAA CGTGTTACTA GCTGGCTTAT CGGCCTTTAT TATTTTAACC
ACACAAGCGC ATGCCGTTAC CCCAACGCCG CAAATGATAG AGCAGTTTAA ACAATTGCCT
AAATCAGAAC AGGAAAGAGT TGCGCGTCAG TATGGTTTAG ACCCTTCAAT GTTGTCAGGC
AGTGCCAATA GCTCTGTTAG CGTAACAAAT CCTACTGTAG TTGAACCTCG TCAAAACCAA
TCAAGTCAAC AATCAGATAC AGCTAAAAAG AACGAGTATG ACTTCAAACA AGACAGTGAT
AAAAATGAAT TAAAACGCTT CGGCTACGAA ATGTTTTCCG GCGAACCAAC GACCTTCGCA
CCTGTGACGG ATGTTCCTGT ACCAAGTGAT TATATGGTCG GTCCTGGTGA TGTCATTAAA
GTTCAGTTAT ACGGAAAAGA GAGTAACGAA TACAGTTTAA CCATTAATCG CGATGGCACG
GTGCAAATTC CCGATTTAGG CCCTGTATCA GTCGCTGGGC TAAGCTTTTC AGATTTACGT
CAAGAATTGT CTAAGCGCAT TAAGCAGCAA ATGATTGGCA TTGAATCAAA TATCACCATG
GGTGAATTAC GCTCTATTCG CATTTTTATC GCTGGTGATG CCTACAAACC AGGCTCTTAT
ACCGTATCAA GTTTATCAAC CATTACTCAG GCGTTATTTG TTGCTGGTGG TGTAAACGAA
ATAGGTAGTC TTCGCAACGT ACAAGTTAAG CGAAGCGGTA AACTAATAGG CTCATTTGAT
TTATACGATT TACTGCTCCG AGGCGATGCT TCTGGAGACA TCAATCTTCG TTCTGGCGAT
GTAGTATTCA TCCCATCAAT CGGTGGTTTA GTCAGTGTTG CTGGTGAAGT GCAACGCCCC
GCGATTTACG AGCTGAAAAA GAATGAAACT ATTGCAGATG TTATCAATAT GGCTGCTGGT
ATCAAACAAG GTGCTTATCC TAGAAATAGT AGTATCGAAC GATATAATGC CAATGGTTTA
AAAAGCATTA TCAATGTCGA TTTAACCTCC GTAAGTGGCA ATAACACCTT AGCAAAAGCT
GGAGATTATA TCCGGGTTAA AAATGCTTCT AATCAATATG AAGATGCTAT TACTATCGTT
GGTGCAGTAG TCCGCCCAGG TAAATACCAG TGGAAGCAAC AACGCATTAG CGATGTGTTG
CCTTCAATTT GGGGCGACTT ATTATTATCT GCTGACTTAG ACTATGGTTT AGTTGTTCGC
GAAATCAACA AACATGGCGA CATAGAAACA TTACAGTTTG CTCCTGGTGA AGCTATTACA
TCACCTAATT CTATTCAAAA TATTGCTTTG CAGCCTCGTG ATAAAATAAT GATATTTAAT
TTCAGTGACG ATACTCAAAA TCGTTTTGAA CTGAATTCAT TAGTTAAAAA GCGTGTCAGT
AAAGTTGAAT CATTAAAAGG TGACTCACTA CTGGATGCCG ATCTATTTAA AGCTGGATTT
GAAACGTTAG ACAATACCGT AGCTAGCAAA TATACCAATC AGATAGCCGG TGTTGCATTA
AATGGGCAAG CATCAGAAGA GCAAACACTG GTTAGCAGTG AAGTCGCTAA AATGCTATCG
AATCTATTCG AAGACCGTGA CTTAATCAAA CTGAGTAACG TTATGTCACG TAAAGAACTA
CTTTACCCGA TAGTGACTAA ATTAACTCAG CAAGGTAATT CACAGCATGG CATTATGATT
GTTGCTATTG CAGGTAAAAT TCGTCACCCA GGTGTATATC CGTTAACAAA CTCTGCCAAA
GTAACTGACT TGGTTAAGGC TGCTGGTGGC TTGTTAGAAG GTGCTTATGT TGAACGTGCA
GAACTGACTC GTACTCATAC AACATCTACA ATATCGGATA TCATCCACAA ACAAATTAAT
CTTTACGCGG CAATCAACGG GAATCAAGAA GACAATATCG AGCTAAAAGG TCGCGATATG
GTCACTATTC TCACCACTCC AGAATGGCAA GAAAGAAAGG TTATCGAAGT TAAAGGTGAA
GTTAAATTCC CTGGTACTTA TAACATCAGA CGTGGTGAGA CGTTATCAGA TGTGATCGCT
AGAGCTGGTG GATATACTGA GTATGCTTAT CCCTCTGCTG CTGTATTTGT ACGTGAATCA
GTGCGAATGC AAGAGCAGAT CGAAATTAAA AAGTTAGCAG ACCAACTTCG CCGAGACATC
GCCACTCGTG GAGTATCAAA AGATGGCTTA AGCATTAGTT ATTCTGATGC ACAATTAATG
CTAACCGATT TAGAAAACAT AAAAGCAGTT GGCAGATTAG TGATTGATTT AAACGCGCTT
AAATTGGGCA TTAAAGAAGC TGATGTTCAA CTTGAAGACA GCGACGTACT TTACGTGCCA
ACCATTAAGC AAACTGTCGC GGTTATGGGC GAGGTTCAAC ATCCTTCAAC TCATAGATTT
AAAGATGGCT TAACCTTAGA CGATTATTTG GTTATGTCTG GTGGGCCAAG AGAGCGCGGT
GATGAAGACC GAGTTTATGT CATCAAAGCT GATGGTTCGG TGATGATGCC AACTCAAAGT
ATTTGGTTTA ATACCGACTC ACAAATTACT GCTGGCGACA CGGTTATTGT ACCGCTAGAC
ACTGAGTACA AAGATAACTT AACCCTATGG TCGCAAGTAA CACAAATTAT ATATAACACT
GCAGTCGCAT TTGCTGCTGT TTCAGGGATC TAA
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| Protein sequence | MLHKTKNVLL AGLSAFIILT TQAHAVTPTP QMIEQFKQLP KSEQERVARQ YGLDPSMLSG
SANSSVSVTN PTVVEPRQNQ SSQQSDTAKK NEYDFKQDSD KNELKRFGYE MFSGEPTTFA
PVTDVPVPSD YMVGPGDVIK VQLYGKESNE YSLTINRDGT VQIPDLGPVS VAGLSFSDLR
QELSKRIKQQ MIGIESNITM GELRSIRIFI AGDAYKPGSY TVSSLSTITQ ALFVAGGVNE
IGSLRNVQVK RSGKLIGSFD LYDLLLRGDA SGDINLRSGD VVFIPSIGGL VSVAGEVQRP
AIYELKKNET IADVINMAAG IKQGAYPRNS SIERYNANGL KSIINVDLTS VSGNNTLAKA
GDYIRVKNAS NQYEDAITIV GAVVRPGKYQ WKQQRISDVL PSIWGDLLLS ADLDYGLVVR
EINKHGDIET LQFAPGEAIT SPNSIQNIAL QPRDKIMIFN FSDDTQNRFE LNSLVKKRVS
KVESLKGDSL LDADLFKAGF ETLDNTVASK YTNQIAGVAL NGQASEEQTL VSSEVAKMLS
NLFEDRDLIK LSNVMSRKEL LYPIVTKLTQ QGNSQHGIMI VAIAGKIRHP GVYPLTNSAK
VTDLVKAAGG LLEGAYVERA ELTRTHTTST ISDIIHKQIN LYAAINGNQE DNIELKGRDM
VTILTTPEWQ ERKVIEVKGE VKFPGTYNIR RGETLSDVIA RAGGYTEYAY PSAAVFVRES
VRMQEQIEIK KLADQLRRDI ATRGVSKDGL SISYSDAQLM LTDLENIKAV GRLVIDLNAL
KLGIKEADVQ LEDSDVLYVP TIKQTVAVMG EVQHPSTHRF KDGLTLDDYL VMSGGPRERG
DEDRVYVIKA DGSVMMPTQS IWFNTDSQIT AGDTVIVPLD TEYKDNLTLW SQVTQIIYNT
AVAFAAVSGI
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