| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2841 |
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| Symbol | |
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| ID | 4279746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3422883 |
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| End bp | 3423863 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135659 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_751519 |
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| Protein GI | 114564005 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3765] Chain length determinant protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.500509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAC AAAACCTACA AGCTACTTAT GACGCAAACT TTGCATCAAC ACAACCAATG
GGCAGCGTTG AAAACGACGA AATCGATTTA CGCGAGCTTT TTGCCGTTAT TTGGAAAGGA
AAATTGCTCA TCATCGCTAT CACTGCAGTG TTTGCAATCG GAGCGGTTAT TTTTGCCATC
AACCAGCCAA ATATCTATAA GTCAGAAGCG CTATTAGCGC CTGCAGAATC AGAGCAAAGT
GGTGGAGGAC TAGCTGCACT TGCAGGACAG TTTGGTGGTT TAGCAAGCAT GGCTGGCATC
AACCTAGATG GTGGCGGTGG TGTTGATAAA ACCCAAATGG CTATTGAGGT GATGAAGTCT
CGTCAATTTA CCAGTAATTT TATACAAAAA CATCACATTT TGCCTGACCT AATGGCGGCT
GAAAAGTGGG ATATGGTAGA TAACATCATT AGTTATGATG AAAATGTATA TAACGTAGCC
AATAGTGAGT GGGTACGAGA GGTTGAGCTA CCATATAAAC CTGAGCCATC AATGCAAGAA
GCTTACAAAG AATTCAGTAA AATTTTTGCC GTTAATGCTG ATAAAGAGAC GGGGATGGTT
ACTGTGTCTT TAGAGTATTT ATCGCCACAA ATAGCCCAAC AATGGGTTAA TTGGTTAGTC
CAAGACATTA ATAAAGAAAT GAAAGACCGC GATGTTGCAG AAGCGACACG CAGTACAACA
TTTTTAAAAT CTCAAATCGA ACAAACTAAT GTTGCTGATA TTCGTTCAAT TTTGTACAAG
TTAATTGAAG AGCAAGCTAA AACTATTATG TTTGCCGAAG TTCGCGATGA GTACGTATTT
AAAACCATCG ATCCTGCATT AGTACAAGAA GAAAAATCAA AGCCAAAACG AGCATTAATC
TGTGTATTAG GCACTATGCT AGGTGGCATG CTAGGTGTCA TGTTGGTATT AATTAGATAT
TTTGTTAAAA AAGAGAATTA A
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| Protein sequence | MTKQNLQATY DANFASTQPM GSVENDEIDL RELFAVIWKG KLLIIAITAV FAIGAVIFAI
NQPNIYKSEA LLAPAESEQS GGGLAALAGQ FGGLASMAGI NLDGGGGVDK TQMAIEVMKS
RQFTSNFIQK HHILPDLMAA EKWDMVDNII SYDENVYNVA NSEWVREVEL PYKPEPSMQE
AYKEFSKIFA VNADKETGMV TVSLEYLSPQ IAQQWVNWLV QDINKEMKDR DVAEATRSTT
FLKSQIEQTN VADIRSILYK LIEEQAKTIM FAEVRDEYVF KTIDPALVQE EKSKPKRALI
CVLGTMLGGM LGVMLVLIRY FVKKEN
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