| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2837 |
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| Symbol | |
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| ID | 4279742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3419098 |
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| End bp | 3420045 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135655 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_751515 |
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| Protein GI | 114564001 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0224093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATGA AAAAAGTATT AGTTACGTGT CCGCCAATGT TAGGCATGTT CGAAGAATTT
GTTGAGCCAG CTAAATTGTT AGGTTTAGAC CTTGTTGCTG CTAAAACAAC ACAGGTTTTA
TCGGAACAAG AATTAATGAC GTTATTGCCC GAGTATGATG GCTGGATCAT TGGCGATGAT
CCTGCAACTA AACAGGTATT TGAGGTGGGT ATTCGAGGTC GACTTAAAGC AGCTGTTAAG
TGGGGGATCG GTATAGACAA CGTAGATTTC CAAGCGTGTA AAGACTTAGG AATTCCTATT
ACTAATACCC CAAATATGTT TGGAGGCGAA GTCGCTGATG TTGGGATCGC GTTATTATTA
GGTTTAGCTA GGAAAACTTA CTTTATCGAT CGTGAAATAA GAAATAATTT TGGCTGGCCA
AAACCTGCTG GTATGAGTGT CGCTGGCAAA AAAGTCGGAG TTGTTGGCTT CGGTGATATT
GGCGAAAGTC TGGTTAAACG TTTGGGCGGA TTTGACGTAG ATGTTACTGT TTTTGACCCT
GGCGTTGAAG GTGATAAAGG TTATAAATAT GTAACAAGAC ATGAATTCCC TAGAGGTGTT
GAAGAACTTG ACTTTTTAGT ATTTACTTGT GCTTTAAATA AACATAATTA TCATATGCTT
AATGCAGATG TGATAAGCAA GTTAAAGCAA GGTGTAATGG TTGTAAACGT TGCGCGAGGA
CCACTAATAG ATGAAGCAGC ATTAATTGAT GCTTTACAGT GTGGTCATGT TGCAGCGGCT
GGATTAGATG TTTTCGAAGT CGAACCTTTG CCAGCAAGCT CGCCGTTACG TGAAATGCCA
CAATGTATTT TTGGCTCTCA CAATGGGAGT AATACGAAAG AAGGTGTAAG GCGAGCAACG
CATCAAGCCA TTTCATATAT TGCGGAATTT TTGAATTCGC AACGATAG
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| Protein sequence | MNMKKVLVTC PPMLGMFEEF VEPAKLLGLD LVAAKTTQVL SEQELMTLLP EYDGWIIGDD
PATKQVFEVG IRGRLKAAVK WGIGIDNVDF QACKDLGIPI TNTPNMFGGE VADVGIALLL
GLARKTYFID REIRNNFGWP KPAGMSVAGK KVGVVGFGDI GESLVKRLGG FDVDVTVFDP
GVEGDKGYKY VTRHEFPRGV EELDFLVFTC ALNKHNYHML NADVISKLKQ GVMVVNVARG
PLIDEAALID ALQCGHVAAA GLDVFEVEPL PASSPLREMP QCIFGSHNGS NTKEGVRRAT
HQAISYIAEF LNSQR
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