| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2835 |
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| Symbol | |
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| ID | 4279740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3416550 |
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| End bp | 3418322 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638135653 |
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| Product | HAD family phosphatase |
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| Protein accession | YP_751513 |
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| Protein GI | 114563999 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3882] Predicted enzyme involved in methoxymalonyl-ACP biosynthesis |
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| TIGRFAM ID | [TIGR01681] HAD-superfamily phosphatase, subfamily IIIC
[TIGR01686] FkbH-like domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0212505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTA TAAAAAATAA TATAAAACTT GTTATTTGGG ATTTAGATGA AACTTTTTGG
AAAGGAACCT TTTCAGAAGA AGGAATTGTT TATCAACAAG CCCATCACGA TCTAGTTATT
GAGTTAACCA AAAGAGGGAT CGTTAACAGT ATATGTTCTA AAAACAACCG TGAAGAAATA
CAAAGTTTTT TAACAGCGAA AGGGCTTTGG GATTACTTTG TATTTGCGGA GATAGGCTGG
GATCCTAAGG GGAAAGCAGT CCAGTCGATA ATTAAAGATA TGGCATTACG GGCAGAAAAT
GTATTATTCA TAGATGATAA TACTGGAAAT ATCAATGAAG TAATATTTGA AAACCCAAAT
ATATCTGCTT GTGAACCCGA TATTATAGAA ACGCTTTTGA GTAGTAAATA CTTATTAGGT
AAAGATGATA ATGAGTTAAG TCGTTTATCG CAATATAAAA TTTTAGAGAG TAAAAGGGAA
ATTTTAAAAG ATAGAAATTT ATCTAACTTT GATTTTCTAG TGGAGTCACA AATTAGAGTT
AATGTTATTG ATAATATAGA TGATAACATA GATAGAGTTT TGGAACTGAT AGAAAGAACC
AATCAGTTAA ATTATACAAA AAATAGAGTA ACTAAAAGTG AACTTTTTTT ACAATTAAAC
AGTGATAATG TTTCTTCAGG CGTCATTAAC GTCATTGATA AGTACGGTGA TTACGGTATT
TCTGGCTTCT ATTTGATGAA AGATAATGAA CTAATACATT TTCTATTTTC TTGTAGAACT
ATGAACATGG GTATTGAGAA TTGGCTATAT AAATATTTAG GTTGTCCTAA ATTAAATGTT
ATAGGTGACG TGGCTTCTAA GGTTGATGAA AGTAGTGATG TGGCTTATAT CACATTAAAT
GAAAATAAGT TTAGTAATCA GGTTGTAAAA AGGGATGGAC GAAGCTATTT GATTGTTGGA
GGATGTGACT TAGATCAAGT CGTTCATTAT CTATCAGGAA AGAACGTAGA TACTCTGTTT
AATTTTGTAA ATAATAAAAA TATAAGTGTC CACGGTGAAC ATACAACTTT TTTAATAAAT
GAATTAACCG AAGATGAATT AAAAGAATTA AACTCTCTAG ATATATATGA GGGTTTTAAA
GGGAATAAGA AATTATATAG CAACAATTGG GATGTGCTTA TATATAGTCC ATTAAATGAT
TATAGTCGTG GATTATATAA ATCGAAGTTG TCTAACTTAT TGATTCCTTT CGATTCTTTT
TCTATTGATT GGACTGATGT AAATAATTTT AATAAACTTC CTCCTCACTT GATCGGGGCT
AGCTCAACTT TTTTCGACTT TTTTAAAGAT AACTATACTT TTAAGGGAGC TATTAAGCCT
ACAGATTTTT ATGATAATCT TGAAAAATTG ATATCTATGT TCCCAAACAA GCACTTTATG
TTTTTAACTG GAGCAGAAGT TAATATCAAT CATAGAGTAA GAGAATGGGA GTTAGATATG
CACATTAGGC ATAGAGAAAT GAATTCTATG CTGGAAAAAT TAAATGACAG TTATGAAAAC
GTTCAATTAA TCGATGTAAG GAAGTTTGTA TCTAGTGAAA CTCAATTGAC GGATAATATT
AGACATTATA TTAAGCCTAT ATATTCAGAA GTTGCTAAAG AAATATGTAG TTTGAGCCCT
AATGATACAT TAAAGTCATC GAATAAATAC TATGCCGTAT TTAAACGATT TGGCCTTAGA
ATTAGAAATA AACTCAAGTT ACAAGTTGGT TGA
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| Protein sequence | MNTIKNNIKL VIWDLDETFW KGTFSEEGIV YQQAHHDLVI ELTKRGIVNS ICSKNNREEI
QSFLTAKGLW DYFVFAEIGW DPKGKAVQSI IKDMALRAEN VLFIDDNTGN INEVIFENPN
ISACEPDIIE TLLSSKYLLG KDDNELSRLS QYKILESKRE ILKDRNLSNF DFLVESQIRV
NVIDNIDDNI DRVLELIERT NQLNYTKNRV TKSELFLQLN SDNVSSGVIN VIDKYGDYGI
SGFYLMKDNE LIHFLFSCRT MNMGIENWLY KYLGCPKLNV IGDVASKVDE SSDVAYITLN
ENKFSNQVVK RDGRSYLIVG GCDLDQVVHY LSGKNVDTLF NFVNNKNISV HGEHTTFLIN
ELTEDELKEL NSLDIYEGFK GNKKLYSNNW DVLIYSPLND YSRGLYKSKL SNLLIPFDSF
SIDWTDVNNF NKLPPHLIGA SSTFFDFFKD NYTFKGAIKP TDFYDNLEKL ISMFPNKHFM
FLTGAEVNIN HRVREWELDM HIRHREMNSM LEKLNDSYEN VQLIDVRKFV SSETQLTDNI
RHYIKPIYSE VAKEICSLSP NDTLKSSNKY YAVFKRFGLR IRNKLKLQVG
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