| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2820 |
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| Symbol | |
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| ID | 4279725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3400051 |
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| End bp | 3401616 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638135638 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_751498 |
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| Protein GI | 114563984 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATCA TCCACCATGG AGCGGTAAAC GGTGTCACAG GATCATGTCA TCAACTGGAT
GTGAATAATT ACAATAATAA CAGTCATAAC CACGGAAACG GCAACAACAT CAGCAGTTAT
CTTATCGATT GCGGGCTATT TCAAGGTGCA GAAACGGCAG GAAAAAGTTC AGCAGACCAA
CTGCAAATCA CCTTTGACAT TCAACATATT AAAGCGCTTA TTATTACCCA TTGCCATATC
GACCATGTTG GGCGAATTCC CTACTTACTG GCAGCAGGAT TCAATCAACC GATTTATGCA
ACAACCGCTA CAGCAGCACT ATTACCACTG GTAATCGAAG ACGCGTTAAA AGTGGGTGTG
ACGCGCGACC CTAAATTGAT CCAGGCTTGT ATCAATCGAC TTAAAAAACT GCTTGTCCCA
GTCGATTACG GTCAGTGGAT AACGCTACCG ATAAACATAC CAACAGCTAT ATCTTCGACA
GAAAGTGCCA CAGAAATGGA CTCTGCATCA TCAATAGAGA AAACAACAAC CGAACCGGCA
ACTATATCAT CGACTGAAAA TACCGAAGAT ATCTCAAAAG AAACAATCGT CACTCCAGCT
ATTTATCACA AAGCAAAACT AAAATTCAAA CCCGCTGGGC ATATACTCGG GTCTGCCTAT
GTTGAAATAG ACTTAAGCGG TCCTAGCGGT AACCATCGAG TTGTTTTTTC GGGTGATTTA
GGCGCAACCT ACGCACCGTT ACTTGCCAGT CCAAAAAGTC CTTACAGAGC AGATACCTTA
GTCATTGAAT CCACTTACGG CGATAAAAAC CATCAAGGTC GTAAAGAACG CAGCAAGCAA
CTCAAAAATA TCATCGAAAG CGCCGTAAAA GATAATGGCG TGGTACTCAT TCCTGCATTT
AGCATCGGCA GAACCCAAGA GCTATTATAC GAATTCGAAC ACATCATTCA TCGCAATAAA
CACAACCCTG TATGGGAAAA CATCGACATT ATCGTCGACT CTCCCATGGC AGCTAACTTC
ACCCAAAAGT ATCGTCAGTT CAAAACACTC TGGGACAACG AAGCCAAAGG TAAACTAGCC
CAGGGACGCC ACCCACTCTA CTTCAACCAA CTCATCACCA TAGACAGCCA CCAGGACCAT
CTTTCAGTAA TCAACTACCT CGACTCAACC CACAAACCCG CCATCATCAT CGCCGCATCC
GGCATGTGCA CCGGCGGAAG AATCACCAAC TATCTCGCCC GCTTCTTACC CATCCCCACC
ACAGACATAC TGTTTGTCGG CTATCAAGCA CAAGGCACTA CAGGCCGAGA CATACAAACC
TACGGCCCAC AAGGCGGATA CGTTTACATC AACGAACTCA AGATTGATAT CAAAGCCGCC
ATCCACACCA TCAGCGGTTA CTCCGCCCAC GCAGACCAAC ACAACCTCAT CAACTTCGTC
AAACGCATGC ACCACAAACC CAGCCACATC AGAATCGTCC ACGGCGACAA TGAAGCCAAA
CAAGCATTAG CAAAGGAATA TAGAAAAATG CTGCCAGAGG CAGAAATCGT TATCGGTAAA
GAATGA
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| Protein sequence | MQIIHHGAVN GVTGSCHQLD VNNYNNNSHN HGNGNNISSY LIDCGLFQGA ETAGKSSADQ
LQITFDIQHI KALIITHCHI DHVGRIPYLL AAGFNQPIYA TTATAALLPL VIEDALKVGV
TRDPKLIQAC INRLKKLLVP VDYGQWITLP INIPTAISST ESATEMDSAS SIEKTTTEPA
TISSTENTED ISKETIVTPA IYHKAKLKFK PAGHILGSAY VEIDLSGPSG NHRVVFSGDL
GATYAPLLAS PKSPYRADTL VIESTYGDKN HQGRKERSKQ LKNIIESAVK DNGVVLIPAF
SIGRTQELLY EFEHIIHRNK HNPVWENIDI IVDSPMAANF TQKYRQFKTL WDNEAKGKLA
QGRHPLYFNQ LITIDSHQDH LSVINYLDST HKPAIIIAAS GMCTGGRITN YLARFLPIPT
TDILFVGYQA QGTTGRDIQT YGPQGGYVYI NELKIDIKAA IHTISGYSAH ADQHNLINFV
KRMHHKPSHI RIVHGDNEAK QALAKEYRKM LPEAEIVIGK E
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