Gene Sfri_2819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2819 
Symbol 
ID4279724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3399036 
End bp3399425 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content43% 
IMG OID638135637 
Producttranscriptional regulator, MerR family protein 
Protein accessionYP_751497 
Protein GI114563983 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA GTGAATTGGC ATCAATTGCC CAGGTATCGG TTAAAACCAT CCGATATTAT 
GAGCAGATTG GATTACTCTC TCCGCCAATC CGTACCAGTA ATGGCTATCG TCATTACCAA
GAAAAAGACA TCGAGACATT AGTATTTATA AGACGATGCA GAGAATTAAA CATCGGACTC
GATGACATCA AGCGTTTGGT TGATACACAA CAAGACCCGA AATCGTCGTG CGCATTAGTC
GACAACATCA TTGCCGAACA GCTTGCTCGC ATCCAACAAA CCCAGCGAGA ACTGGCATTA
CTAGAACAAT CATTAGCCGC ACTCGCGAGC TGCTGTAAAA GCCATCAGAT CAAAGATTGC
AGTATTTTAC AGACGCTGAA ATCGGCTTAG
 
Protein sequence
MKISELASIA QVSVKTIRYY EQIGLLSPPI RTSNGYRHYQ EKDIETLVFI RRCRELNIGL 
DDIKRLVDTQ QDPKSSCALV DNIIAEQLAR IQQTQRELAL LEQSLAALAS CCKSHQIKDC
SILQTLKSA