| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2816 |
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| Symbol | |
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| ID | 4279721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3393145 |
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| End bp | 3393711 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135634 |
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| Product | transcriptional regulator, TetR family protein |
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| Protein accession | YP_751494 |
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| Protein GI | 114563980 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGA AAAATTTTGA ACGAGCGGAC GTATTAGATA AGGTCATCAC CCTATTTTGG
CAAAATGGCT ATGCCGCATC AAGCATTCAG CAAATCACTA AAGCCACTGG ATTAAAACCA
GGTAGCTTAT ATTATGAATT CGATAGTAAA GAAGGCTTAT TCCAAGCAGC CTTAGCACGC
TATGCCACCT TTTCGATTGA GGCTATTCAT CAACTAATGC AACAGGCTGA CGATGTCAAA
GCAGGTATTA GACAGATCCT CGACAACATT GTTGAGCAAT CAAAGTCTTG TGATTACTGC
GGTTGCTTCT TAATCAAAAC TCAACTTGAA CTCGCCTCTC AAGGTAACGA GCTATACAAA
TTTGCTTCAT CACAATTAAC TGAGATTGAG CATGTATATC AACATTACCT GAGCCAATTA
TATGAGGCTG AAACAGCTAA AGCCTATGCA GCTCAACTGA TGACCGTCAC ATTCGGCATC
CGAATCTATG GCTATCAGTC AGAATCAGCA GCAACCCAAA TCAACACTAT CAACGCGCTA
CTGCCATGGC TAAAAGTTGA GTGCTAA
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| Protein sequence | MAKKNFERAD VLDKVITLFW QNGYAASSIQ QITKATGLKP GSLYYEFDSK EGLFQAALAR
YATFSIEAIH QLMQQADDVK AGIRQILDNI VEQSKSCDYC GCFLIKTQLE LASQGNELYK
FASSQLTEIE HVYQHYLSQL YEAETAKAYA AQLMTVTFGI RIYGYQSESA ATQINTINAL
LPWLKVEC
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