Gene Sfri_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2815 
Symbol 
ID4279720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3392373 
End bp3393017 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID638135633 
Productredoxin domain-containing protein 
Protein accessionYP_751493 
Protein GI114563979 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTAT CCACCCAGCT GACTGAAAAA CGAGATGCCA ACGCTGCCAA TTTACCTCCT 
GAGGTATTGG CGATCATGTC GGATGCGACG TTAAACCTGA AGTTATCCGG CATTATCGAT
AGCGCACCTA AAGCGGGTGA TAAACTGGCT GCGTTTTCGT TAACCAATCC ATTGGGCGTT
ACCCGTCATT TATCCGAGTT GTTAGTTAAT GGACCGGTTG TGGTGACATT TTATCGTGGT
AGTTGGTGTC CATATTGTAA TTTAGCGCTG CGCGCCTATC AGCAACATCT AGCTGAGTTT
AAACAGTTAG GGGCAACGTT TGTGGCTATT ACGCCTGAGT TGCCTGATAT GTCACTTTCA
ACCGCAGAGA AAAATGAACT TGAATTTGAT GTCTTGTCAG ATGTGAATGC AGAGTATGCC
AAAGCGCTTG GTTTAGTCTT TTCGTTACCC GATTCTATTC GTGATCTTTA TAAGAAATTT
GGTGTAGAAG TAGAAAAACA TAATGGTGCG GATCAATTTA ATTTTCCATT AGCGGCGACC
TTTGTGGTTG CAAAAGACGG CACCATTGTG AAAGCATTTG TTGATGCTGA TTATACTTAC
CGTCTTGATC CTGAAGATAT CATTAGCTCA TTAAAAGCGC TGTAG
 
Protein sequence
MSLSTQLTEK RDANAANLPP EVLAIMSDAT LNLKLSGIID SAPKAGDKLA AFSLTNPLGV 
TRHLSELLVN GPVVVTFYRG SWCPYCNLAL RAYQQHLAEF KQLGATFVAI TPELPDMSLS
TAEKNELEFD VLSDVNAEYA KALGLVFSLP DSIRDLYKKF GVEVEKHNGA DQFNFPLAAT
FVVAKDGTIV KAFVDADYTY RLDPEDIISS LKAL