Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2815 |
Symbol | |
ID | 4279720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3392373 |
End bp | 3393017 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135633 |
Product | redoxin domain-containing protein |
Protein accession | YP_751493 |
Protein GI | 114563979 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTAT CCACCCAGCT GACTGAAAAA CGAGATGCCA ACGCTGCCAA TTTACCTCCT GAGGTATTGG CGATCATGTC GGATGCGACG TTAAACCTGA AGTTATCCGG CATTATCGAT AGCGCACCTA AAGCGGGTGA TAAACTGGCT GCGTTTTCGT TAACCAATCC ATTGGGCGTT ACCCGTCATT TATCCGAGTT GTTAGTTAAT GGACCGGTTG TGGTGACATT TTATCGTGGT AGTTGGTGTC CATATTGTAA TTTAGCGCTG CGCGCCTATC AGCAACATCT AGCTGAGTTT AAACAGTTAG GGGCAACGTT TGTGGCTATT ACGCCTGAGT TGCCTGATAT GTCACTTTCA ACCGCAGAGA AAAATGAACT TGAATTTGAT GTCTTGTCAG ATGTGAATGC AGAGTATGCC AAAGCGCTTG GTTTAGTCTT TTCGTTACCC GATTCTATTC GTGATCTTTA TAAGAAATTT GGTGTAGAAG TAGAAAAACA TAATGGTGCG GATCAATTTA ATTTTCCATT AGCGGCGACC TTTGTGGTTG CAAAAGACGG CACCATTGTG AAAGCATTTG TTGATGCTGA TTATACTTAC CGTCTTGATC CTGAAGATAT CATTAGCTCA TTAAAAGCGC TGTAG
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Protein sequence | MSLSTQLTEK RDANAANLPP EVLAIMSDAT LNLKLSGIID SAPKAGDKLA AFSLTNPLGV TRHLSELLVN GPVVVTFYRG SWCPYCNLAL RAYQQHLAEF KQLGATFVAI TPELPDMSLS TAEKNELEFD VLSDVNAEYA KALGLVFSLP DSIRDLYKKF GVEVEKHNGA DQFNFPLAAT FVVAKDGTIV KAFVDADYTY RLDPEDIISS LKAL
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