| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2803 |
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| Symbol | |
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| ID | 4279709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3373869 |
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| End bp | 3374702 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135622 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_751482 |
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| Protein GI | 114563968 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACATA TAGAAGGTTT AGATGCTTTA GTGGAGCAGG CACCTGAGTT TTTGATGACT
TATGGTCTTA AAGCGCTAGC TGCTATTGTT ATTTTTCTCA TCGGTAAGTA TTTTTCCGGT
GTAGCAAAAC GCATAACAAC CAAATTACTG ACTAATCGTA AAGTGGACGC AACAGTCGTT
TCGTTTGTGG CAAACTTAGC GTGGATGTTG GTCTTTGTAT TTACTATTGT CGCCACGCTT
GGTCAAGTTG GCGTGCAAAC AGCGTCACTA GTTGCTGTTA TCGGTGCCGC GGGTTTAGCT
GTTGGTTTAG CGTTACAAGG TTCACTTTCG AACTTTGCAT CAGGCGTATT GATGGTGCTT
TTCCGTCCAT GCCGCGTAGG TGACTTTATT GAAGCCGCTG GTGTTGCCGG TGTCGTTGAT
GAGATTACGA TTTTCTCAAC ACGTTTACGT ACTGGTGACA ACAAAATGAT TATCGCGCCT
AACTCAGCGA TTATGAATGG CACTATCACT AACTACTCAG CACTAGAAAA GCGTCGTATC
GATTTAACTA TTGGTGTTTC GTATACAGCT GACATTGCTA AAACTAAGAA GGTATTAGCG
GATATTTTAG ATAACAACCA GTTTGTGTTA AAAGATCCTG GTTATACTAT TGGTCTAGCT
GAGCTTGCTG ATTGTTCAAT TAACTTTGTC GTACGTCCGT GGGTTAAAAC ACCAGACTAT
TGGACTGCGC GTTTTGAATT ACTTGAGCAA ATCAAGAATG CATTAGATGC TGCTGAGATT
GAAATTCCAT TCCCACAAAT GGATTTACAT GTGAAAGAAG TTCCAGCAAA ATAA
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| Protein sequence | MEHIEGLDAL VEQAPEFLMT YGLKALAAIV IFLIGKYFSG VAKRITTKLL TNRKVDATVV
SFVANLAWML VFVFTIVATL GQVGVQTASL VAVIGAAGLA VGLALQGSLS NFASGVLMVL
FRPCRVGDFI EAAGVAGVVD EITIFSTRLR TGDNKMIIAP NSAIMNGTIT NYSALEKRRI
DLTIGVSYTA DIAKTKKVLA DILDNNQFVL KDPGYTIGLA ELADCSINFV VRPWVKTPDY
WTARFELLEQ IKNALDAAEI EIPFPQMDLH VKEVPAK
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