| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2793 |
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| Symbol | |
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| ID | 4279699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3358928 |
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| End bp | 3360580 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135612 |
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| Product | L-lactate permease |
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| Protein accession | YP_751472 |
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| Protein GI | 114563958 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1620] L-lactate permease |
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| TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.956098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATAT TACAAATACT AGCAAGCTTA ACCCCCATTA TTAGCGTAAT GGTATTCTTA
GTGCTTATGC GCTTACCAGC GTCTAAAGCA ATGCCCATAT CCATGGTCGC TACAGGCCTT
GTAGCAATGT TTATTTGGCA AATGGATACG CAACTTCTTG CGGCATCTGT AGTTGAAGGT
CTTCTCGCTG CGTTAACACC GCTGACCATT ATTTTTGGCG CGGTATTTTT GTTAAATACC
CTTAAATATT CTGGCGCCAT GGACACGATT CGTTCTGGCT TTACCAACAT CAGTGCAGAT
GCACGTGTTC AGGTGATTAT TATTTGCTGG TTGTTTGGCT CGTTTATTGA AGGTTCTGCA
GGCTTCGGTA CTCCAGCAGC CATCGGCGCA CCGCTACTAG TATTATTAGG TATCCCACCC
ATTGCTGCTG CCGTAGTGGC CTTGATTGCT GATTCAACAT CCGTGTCATT TGGTGCAATT
GGTTTACCAG TGCTATTTGG GATGGAACAA GGCTTAACGG AAGGCGGCGT AAACATGGCA
GCAGCTCAAA TTGCTGAACA TGGTGGCACC TTCGCAGGTT ACGCACAGTA CATTGCTAAA
CACATGATCA CCATAGATTT AATGACAGGT ACATTAATTC CGTTAGTGAT GGTTTGTGTA
TTAACAGGCT TTTTTGGTCG CAACAAGTCA ATTAAAGAAG GTTTACAAGT TTGGAAATTT
GCAATATTTG CAGGTTTTGC CTTTACCATT CCAGCATGGT TAATTAACTA TTTTGCTGGT
CCTGAATTCC CTTCTGTTAT CGGCGCACTT GTGGGTATGG CGTTAGTCAT CCCTGTTGCG
AGAAAAGGCT GGTTACTGCC ATCAACACCT TGGTGTGACT TTACCGAAAA CGACAATAAA
TCAGAAGAAG AGCTCGCGAT TAATCAAACA CCGGTTAAAT TCTCACAAAT TGCCGCTTGG
TCTCCATACA TCATTATGGC TGCGCTATTA GTCTTATCTC GTGTCGTTGC TCCATTTAAA
AGCTGGTTAC TCGGCTTTAA CATCAGCTGG ACAGGTTTAT TAGGCACAGA GCTTAAAGCT
GGCTTTGCTA CATTATATGC ACCGGGGATC TTCTTTGTTG TTGTATGTTT ATTCGGTTTT
ATCTTATTTA AAATGAAACC AACTGCGATG AAGCAATCAA TAACCGTTTC TTGTCGCTCA
ATGTTACCAA CAATCATTTC ACTAGGTGCA TCAGTACCTA TGGTGAAAAT ATTCCTAAAT
TCAGGAGAAA ATGGTGCAGG TCTAGCTTCA ATGCCTGTTG CATTAGCAGA CCTACTGGCC
AATAGCATGG GTTCAGTTTG GGCTTGGGTT TCACCTATTG TCGGTATTTT TGGTGCATTC
CTATCGGGTT CTGCGACATT CTCAAACATG ATGTTCTCAG GCTTGCAGTA TTCAGTTGCA
GATAATATCG GCATGAATCA CGCCATCGCG TTAGCGTTGC AAGGCATTGG AGCCAATGCG
GGCAACATGA TGTGTGTAAT GAACGTCGTG GCTGCTGCTA CTGTGGTAGG TATGGCTGGT
CGTGAATCTG AAATTATTCG TAAAACAATG CCTATCGCAC TGGGTTATGC CCTAGTTGCA
GGCACTATTG CTGTTATCTG GGGTGGATTC TAA
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| Protein sequence | MTILQILASL TPIISVMVFL VLMRLPASKA MPISMVATGL VAMFIWQMDT QLLAASVVEG
LLAALTPLTI IFGAVFLLNT LKYSGAMDTI RSGFTNISAD ARVQVIIICW LFGSFIEGSA
GFGTPAAIGA PLLVLLGIPP IAAAVVALIA DSTSVSFGAI GLPVLFGMEQ GLTEGGVNMA
AAQIAEHGGT FAGYAQYIAK HMITIDLMTG TLIPLVMVCV LTGFFGRNKS IKEGLQVWKF
AIFAGFAFTI PAWLINYFAG PEFPSVIGAL VGMALVIPVA RKGWLLPSTP WCDFTENDNK
SEEELAINQT PVKFSQIAAW SPYIIMAALL VLSRVVAPFK SWLLGFNISW TGLLGTELKA
GFATLYAPGI FFVVVCLFGF ILFKMKPTAM KQSITVSCRS MLPTIISLGA SVPMVKIFLN
SGENGAGLAS MPVALADLLA NSMGSVWAWV SPIVGIFGAF LSGSATFSNM MFSGLQYSVA
DNIGMNHAIA LALQGIGANA GNMMCVMNVV AAATVVGMAG RESEIIRKTM PIALGYALVA
GTIAVIWGGF
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