| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2789 |
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| Symbol | |
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| ID | 4279695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3353998 |
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| End bp | 3354879 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135608 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_751468 |
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| Protein GI | 114563954 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00992702 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGCTG AAGCAATAAC AACATACCAA AATCGCGTTA ATGGAATTCT TAACCAACAT
TTAACGCTGC TCGATGACGC TGCACCAGAT TTAAAAGCAG CGATGCTGCA TGGCGCGCTA
TTGGGCGGGA AACGCATAAG ACCATTTTTG GTCTACAGTG TAGGTGACAT GTTAGGCGTT
AACATTAATG CACTTGATAA AGCCGCTGCT GCCATTGAGT GTATTCATGC CTATTCGTTA
ATACACGATG ACTTACCGGC AATGGATAAC GATGCTCTTC GTCGTGGCCA ACCTACTGTG
CATATTGCAT TTGACGAAGC CACCGCTATT TTAGCCGGTG ATGCATTGCA AACATTGGCT
TTTGAAATTA TCACAGCCCC TTGTAATGAC TTACATCCGA AGCAACAACT GGCGATGGTC
AGAGTACTCG CGAAAGCATC AGGCTATCAG GGTATGTGCG GTGGGCAAGC GATTGATTTG
AGTGCTACAG ATCACAGTAT AAATTTAGAC CGATTAACCG AATTACATAA TAAAAAAACC
GGAGCGTTAA TCAGTTGTGC GGTTGAGCTT GCCTTAATTG CTGCTGACGT ACCCGATGAG
CATTACAAAT TAATGATGAA ATATGCCCAT ACGCTTGGGC TAGCTTTTCA AGTGCAAGAT
GATATTTTAG ATATTACCGC TAGCACCGAA GAGCTAGGCA AACCACAAGG CAGCGATCAG
CAATCGAATA AAAGCACTTT CCCGAAACTA TTAGGTCTCG ATGGTGCCAA AGCCTGTGCA
GAACAACTAA TACAAGATGC ACTATCAGCG CTGACTAAAT TACCATACAA TAGCCAGTTA
ATTGCAGACT TCGCCCACTA CATTATTGAG CGAAGATTAT AA
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| Protein sequence | MLAEAITTYQ NRVNGILNQH LTLLDDAAPD LKAAMLHGAL LGGKRIRPFL VYSVGDMLGV
NINALDKAAA AIECIHAYSL IHDDLPAMDN DALRRGQPTV HIAFDEATAI LAGDALQTLA
FEIITAPCND LHPKQQLAMV RVLAKASGYQ GMCGGQAIDL SATDHSINLD RLTELHNKKT
GALISCAVEL ALIAADVPDE HYKLMMKYAH TLGLAFQVQD DILDITASTE ELGKPQGSDQ
QSNKSTFPKL LGLDGAKACA EQLIQDALSA LTKLPYNSQL IADFAHYIIE RRL
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