| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2785 |
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| Symbol | |
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| ID | 4279691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3349868 |
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| End bp | 3351322 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135604 |
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| Product | thiamine biosynthesis protein ThiI |
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| Protein accession | YP_751464 |
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| Protein GI | 114563950 |
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| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase
[COG0607] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.22936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTA TTGTAAAGCT GTACCCTGAA ATTATGATGA AGAGCAAGTC GGTAAGAATG
CGCTTTACCA AAATGCTTGA AACTAATATA CGTAATGTGC TTAAAAATGT GGATGAAGGT
GCAAAAGTAC AACGGTTATA CGATCGTATC ATCGTGCAAG TACCGAGCGA TAAACCTGAA
TTGTGTGACG TTTTTGCAGA TCGACTAGCT TGTATTCCAG GTATTGCTCA TGTGGTGCAA
GTGAGTGAGT ACAGTTTTGA TTCGATCGAT CATATTTATC AGCAAGCTTT GCCTAAATAC
CGTGATGAAA TTGCCGGTAA AACTTTTTGT GTCCGCGTAA AACGTTCTGG TAATCATGAC
TTTAATTCAA TTGATGTTGA GCGTTATGTC GGTGGTGGAT TAAATCAACA CACTGAGGCG
CTAGGGGTAA AACTTAAAGA CCCTGACGTA ACCGTTAATC TTGAAATCAA TCAAGATAAG
CTTTACATGG TTGAACGTCG CATTCAAGGT TTGGGCGGTT TTCCTATGGC GACACAAGAA
GATGTGTTGT CACTTATTTC GGGTGGTTTC GATTCTGGTG TGTCGAGTTT TCAGTTTATT
AAAAAAGGCG CTCGTACCCA TTACTGTTTC TTTAATTTAG GTGGCGCTCA GCACGAAATT
GGCGTTAAGC AAGTCGCGTA TCACCTGTGG AAAAAGTACG GTGAGTCTCA CAAAGTACGT
TTTGTGTCAG TGCCATTCGA GCCCGTGGTT GAAGAGATTT TAGAGCGTAT TGATAACGGT
CAAATGGGTG TGGTACTTAA ACGTGTAATG ATGCGTGCAG CGACACGTAT TGCTGACAAA
TACGGTATTC AAGCGTTAGT AACAGGTGAG AGCTTAGGTC AAGTATCTAG TCAAACACTG
ACTAATCTAA ATGTTATCGA TCGCAGTACC GATTTATTGA TTTTACGCCC GCTTATCGCA
ATGGATAAAC AAGATATTAT TAATCAGAGC CGTATTATTG GCACTGAAGA TTTTGCGAAG
TCTATTCCCG AGTATTGTGG TGTGATTTCA CAAAAACCTA CAGTTAAAGC GGTATTATCT
AAGGTTGAAG CAGAAGAGCT GAAATTCTCT GAAGATTTAA TCGACCGTGT AGTAGCATCT
GCTGTGGTAA TGGATATTCG TGATATTGAA GCTGAAATGA ACCAACAAGT GACCGAAACT
GAAACGGTTA AAGACGTGGC TTCAGGTGAA ATAATCATTG ATGTTCGTGC TCCTGAAGAA
GAAGAGCGTA GCCCATTATT AATTGATAAT GTAATGGTTA AAGCGATTCC ATTCTTTAAG
TTAGCGACCC AATTTGCCGA TTTAGATAAG TCTAAAACGT ATTTATTGTA TTGTGACCGT
GGTGTGATGA GTAAGCTGCA AGCCTTATAT CTTGTAGAGC AAGGTTATAC TAACGTTAAA
GTGTATCGTC CTTAA
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| Protein sequence | MKFIVKLYPE IMMKSKSVRM RFTKMLETNI RNVLKNVDEG AKVQRLYDRI IVQVPSDKPE
LCDVFADRLA CIPGIAHVVQ VSEYSFDSID HIYQQALPKY RDEIAGKTFC VRVKRSGNHD
FNSIDVERYV GGGLNQHTEA LGVKLKDPDV TVNLEINQDK LYMVERRIQG LGGFPMATQE
DVLSLISGGF DSGVSSFQFI KKGARTHYCF FNLGGAQHEI GVKQVAYHLW KKYGESHKVR
FVSVPFEPVV EEILERIDNG QMGVVLKRVM MRAATRIADK YGIQALVTGE SLGQVSSQTL
TNLNVIDRST DLLILRPLIA MDKQDIINQS RIIGTEDFAK SIPEYCGVIS QKPTVKAVLS
KVEAEELKFS EDLIDRVVAS AVVMDIRDIE AEMNQQVTET ETVKDVASGE IIIDVRAPEE
EERSPLLIDN VMVKAIPFFK LATQFADLDK SKTYLLYCDR GVMSKLQALY LVEQGYTNVK
VYRP
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