| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2783 |
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| Symbol | |
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| ID | 4279689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3348361 |
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| End bp | 3349272 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135602 |
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| Product | DNA-binding transcriptional activator GcvA |
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| Protein accession | YP_751462 |
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| Protein GI | 114563948 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.029199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAGAC GATTACCTCC TTTGAATGCA GTTAAAGCAT TTGAAGCTGC AGCACGACAT
TTGAGCTTTA CCCGCGCCGC AGAAGAGTTG TTTGTCACTC AGGCTGCAGT GAGTCATCAA
ATTAAAGCAT TAGAAGATTT TTTAGGGCTA AAACTGTTTA GGCGTAAAAA TAGATCATTA
TTGTTAACAG AAGAAGGCCA AAGCTATTTT CTGGACATTA AAGACATTTT TATTGAGCTC
GGCGAGGCGA CTAATCGCCT GCTTGCCCGA AGCGCGGTGG GATCGTTAAC GGTGAGCATG
TCTCCGAGTT TTGCTATTCA ATGGTTAGTG CCTCGTTTAG CTAAATTTAG CGAAAAAAAT
CCTGATATTG ATGTGCGTAT TAAAGCGGTA GACAGTGATG CCAGTTCGTT AACGGATGAT
GTCGATGTGG CTATTTATTA CGGTCAAGGT AATTGGCCTG GACTACGTGC TGATAAACTG
CGTAATGAAG TGCTGATTCC CGTATGTTCG CCATTATTAC TCAATGGTCC TAAGCCATTA
ATTCAGCCTA GTGATTTAAA ACTCCACACT TTATTACATG ATTCCAGCCG TCAAGATTGG
CAGGCATGGT TTAGGCAATG TGGCGTAACT GACATCAATG TCAATCAAGG GCCTATATTT
AGCCATTCTT CATTGGTACT ACAAGCAGCT GCGCATGGCC AAGGTGTGGC ATTAGGATAT
AGCGTACTAG CAAGACCTGA TATCAAAGCA GGGCGCTTAG TGTGCCCGTT TTCTGAGGTG
CTGGTGAGCA AAGATGCTTA TTATTTAGTG TGTCAGCAAA ATCATTCTGA AATAGGTAAA
ATTTCAGCTT TTAGAGAGTG GATGGTTGAT ATGTTTGCAG AGGAGTCGCG TAGTGAGTTG
CTTACCGGAT AA
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| Protein sequence | MSRRLPPLNA VKAFEAAARH LSFTRAAEEL FVTQAAVSHQ IKALEDFLGL KLFRRKNRSL
LLTEEGQSYF LDIKDIFIEL GEATNRLLAR SAVGSLTVSM SPSFAIQWLV PRLAKFSEKN
PDIDVRIKAV DSDASSLTDD VDVAIYYGQG NWPGLRADKL RNEVLIPVCS PLLLNGPKPL
IQPSDLKLHT LLHDSSRQDW QAWFRQCGVT DINVNQGPIF SHSSLVLQAA AHGQGVALGY
SVLARPDIKA GRLVCPFSEV LVSKDAYYLV CQQNHSEIGK ISAFREWMVD MFAEESRSEL
LTG
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