| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2772 |
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| Symbol | |
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| ID | 4279678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3332638 |
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| End bp | 3334464 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135591 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_751451 |
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| Protein GI | 114563937 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.919239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACCTA CTTCTCTTGC AATTTTAACC AGCAGTGTCA TTTTTTCGAT GAGTTGGGCA
ATGCCAGCAC TTGCAGATGT CGATTACCAT ATCGATATTA ATCAACCTAC ACACCATTTA
GCTCAAGTGA GTGTTTCATT TCCTCAATCG GATTCGGACG TATTAACGGT TAATTTACCG
GTATGGCGAA CGGGTCGTTA TCAAGTATTA CCGGTTGCAG ATGGAGTAAG ATTGTTTCAT
GCGACCGACA GCAAAGGGAA GTCATTACCT TGGAAGCGTA CCGCCAGCGG TGAATGGCAA
ATCGCCTTAA CTAAACCTAC ATCGGTGAAG GTGACATATC AATTGCATGC CAATGAGCTT
GGTGAGCGTT TACGTCACAT TGATAGTAGT CATGCTTTTT TAGATGCCAG TGGTGTCTTT
ATGTATAGCC CTGAATTTCG TCAACAACCT GTTACTGTCA ACATGGAAGT ACCAGAAGGT
TGGAAAAGCT ATTCTGGCAT GGATAAGGGC AACACATCAC ATTCATTTAA AGCGGCCAAT
TATGATGTGT TAGTTGATTC GCCGATAGAA ACCGGCATAA ACCAGCATGT CAGCTTTGAG
GCTGATGGTC GTGATTACGA CGTGGTTTTT TGGGGCGAAG GCAATTACGA TACTCAAAAA
ATTGTCGCAG ATCTCACTAA AATCAGTGGC CAGGCATCGG CTATTTGGCC TGATTACCCG
TTTAAGCGAT ATGTTTACAT GGTGCATGCA ACCAGTGGTG CTCGTGGCGC AACAGAACAT
CTCAACTCTA CCATTATCCA ACTACCACGA TTTAATTTCC GTGAACGCGA AGATTATTTG
CGTTTTATTA GTACCGCTTC GCACGAGTTT ATTCATACCT GGAATGTTAA AGCTTACAGA
CCTCAAGGGC TGGTTCCGTA TGATTATCAG TCGGAAAATA TGACCGATTT ACTGTGGATG
GCTGAAGGCT CCACCAGTTA TTTCCAAAAT CAGTTGTTGT TACGCGCTGG AGTGATAACA
GCCAAAGAGT TTTTTGACGA TTTAAGCCAA CGAATTGTGC TTAATCAACA TAACCCAGGT
CGTGAAGTCC AATCTGTAGC AGAAGCCAGT TTAGGCCAGT GGAGTAGCAC TTGGGGCGAT
TATGCGGTTA ATCACAGTGT GAATATTTAC TCTGAAGGTT ACTTGGCTTC AATGGCACTT
GATTTTAGTT TGCTAAGCGA TACGCAACTT GCTCATTCAT ATAGAGATGT CCATAAAGCG
CTTTATCAAC AATACAAAAT TCCATTAAGT TATAACGTCG CGGACGTGCA ATCTATTTTA
AAAAACCTTT CTGGTAAAGA TTACCAGTCG TGGTGGACTG AATATGTAAA CCAACCATTT
AGTTTACCTT TTGATGACTT GTTGGCACAT GCTGGTTTGA TCACGACTTA TGGTCAATCT
CCTAAAACAG AAGTAGATGC CGGAATGATG TTGTCTGGCT TATATAACGA TTTAATCATT
GCAAGTGTGC TAAAAAATGG CCCAGCTTGG AATGCGGGTG TTGCTGCCGG AGATGAAATT
GTTGCGGTTA ATGGTTTAAA GGTTACCGCG GATGGTTTAA CTAAACGTCT TAATGATTTT
AATGTTGGTG ATACGATTAA ACTAAGCATA TTCAGGGATG AGCGTTTAAA AGAAGTGAGT
TTACTCCTAA CGGAACAACC CAAAGGTGAC TTATCAATTG CGCCTGTGGA TAAGGTGACT
GATGCGCACA AAGCGTTTTA TAAAGCGTGG TTGGGGGTTG AATGGCCGTT TAATGACGAG
GGTGAGTGGA TTAACACTAC TGACTAA
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| Protein sequence | MKPTSLAILT SSVIFSMSWA MPALADVDYH IDINQPTHHL AQVSVSFPQS DSDVLTVNLP
VWRTGRYQVL PVADGVRLFH ATDSKGKSLP WKRTASGEWQ IALTKPTSVK VTYQLHANEL
GERLRHIDSS HAFLDASGVF MYSPEFRQQP VTVNMEVPEG WKSYSGMDKG NTSHSFKAAN
YDVLVDSPIE TGINQHVSFE ADGRDYDVVF WGEGNYDTQK IVADLTKISG QASAIWPDYP
FKRYVYMVHA TSGARGATEH LNSTIIQLPR FNFREREDYL RFISTASHEF IHTWNVKAYR
PQGLVPYDYQ SENMTDLLWM AEGSTSYFQN QLLLRAGVIT AKEFFDDLSQ RIVLNQHNPG
REVQSVAEAS LGQWSSTWGD YAVNHSVNIY SEGYLASMAL DFSLLSDTQL AHSYRDVHKA
LYQQYKIPLS YNVADVQSIL KNLSGKDYQS WWTEYVNQPF SLPFDDLLAH AGLITTYGQS
PKTEVDAGMM LSGLYNDLII ASVLKNGPAW NAGVAAGDEI VAVNGLKVTA DGLTKRLNDF
NVGDTIKLSI FRDERLKEVS LLLTEQPKGD LSIAPVDKVT DAHKAFYKAW LGVEWPFNDE
GEWINTTD
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