Gene Sfri_2767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2767 
Symbol 
ID4279673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3327068 
End bp3328363 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content42% 
IMG OID638135586 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_751446 
Protein GI114563932 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR02966] phosphate regulon sensor kinase PhoR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00352447 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATCT CGTACTCTGG ATATCGTTTA TTTTTCCGGT TAGCTTTATT GCTTGTTTTA 
TTTATGCTTA TCGGCGCTTT ATTCAATCAA GTTGTTATCG TAATGCTATT AGGCTCGATT
GCATTACTTG TGTGGCATTA TCGTCAACTT ACTCGTTTAA ACTTCTGGTT ATGGAAAGAT
AAAAAGCTTA CGCCTCCTCA AGGGCGTGGA AGCTGGGAGG GGGTATTCAA TGGAATATAT
CGCCTGCAGG GCAAGAATCG CCGTCGAGTG GGTCAGTTAG CGACTTTATT AGCTCGTTTT
CGTCAAGGCG CTGAGGCCTT ACCAGATGCG GCAGTAGTAC TTGATGCAGA ACATAATATC
TTATGGTGTA ACAAGCTCGC TCAATTAATC TTAGGCTTTG TTTGGCCTCA AGATAATGGT
CAGAGAATTG ATAACCTTAT TCGCCATCCT GATTTTTCGA CTTATATAAA GAAAGCACAA
TACAAAGAAC CATTAGAAAT CCCTTCTCCG GTGTCAGATA AGCGATTACT TGAAATTCGA
GTAATGAGCT ATGGCGATCG ACAATTGTTG TTAATTGCTC GAGATGTCAC TCGAATTCAT
CAGTTAGAAG GTATGCGCAA AGATTTTGTG GCTAACGTTT CCCATGAACT TAAGACCCCA
CTGACAGTAT TGCAGGGGTA TTTAGAAATT ATGCAAACCA TGGAAGACGC AGACTCTCCT
AATCACAAAC CACTATCGTT GATGCAGCAA CAGACGACTC GAATGCAGTC GATGGTTGAG
CAATTGTTGG CCCTGTCGCG CATTGAAGAT GCTGTGGATA TTGATTTATC GCAAACGGTC
AATATGTCAT TGATGATGGA AATTCTTAAA GAAGAGGCCA AAGCCCTTGC TGGCACCGAC
TATACATTAG TGTTTAATTG CGAACCGGGT TTGAATACCC ATGGCAATGA ATTGCAATTA
CGCAGTGCTT GCTCCAACTT GATTTCAAAT GCAATACGTT ATACCAGCCC TGGTGGAACG
ATTTCGGTTA ATTGGCAAAG TGTTGCAACC GGAGCGTTGT TTTCGGTGGC AGATACTGGG
GTGGGTATCG CTCCACAACA TATTAACCGC TTAACTGAAC GCTTTTATCG AGTAGATAAT
GCGCGTTCAA GTAAAACTGG TGGCAGTGGT TTAGGGTTAG CGATAGTAAA ACATGCTTTA
AACCATCATC ACAGTGAGCT TAAGGTGACG AGTGAGTATG GCAAAGGCAG TATCTTCAGT
TTTGTTATTC CATCGCACTT GTTAGTTCGG CAATAG
 
Protein sequence
MFISYSGYRL FFRLALLLVL FMLIGALFNQ VVIVMLLGSI ALLVWHYRQL TRLNFWLWKD 
KKLTPPQGRG SWEGVFNGIY RLQGKNRRRV GQLATLLARF RQGAEALPDA AVVLDAEHNI
LWCNKLAQLI LGFVWPQDNG QRIDNLIRHP DFSTYIKKAQ YKEPLEIPSP VSDKRLLEIR
VMSYGDRQLL LIARDVTRIH QLEGMRKDFV ANVSHELKTP LTVLQGYLEI MQTMEDADSP
NHKPLSLMQQ QTTRMQSMVE QLLALSRIED AVDIDLSQTV NMSLMMEILK EEAKALAGTD
YTLVFNCEPG LNTHGNELQL RSACSNLISN AIRYTSPGGT ISVNWQSVAT GALFSVADTG
VGIAPQHINR LTERFYRVDN ARSSKTGGSG LGLAIVKHAL NHHHSELKVT SEYGKGSIFS
FVIPSHLLVR Q