Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2767 |
Symbol | |
ID | 4279673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3327068 |
End bp | 3328363 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135586 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_751446 |
Protein GI | 114563932 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00352447 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTATCT CGTACTCTGG ATATCGTTTA TTTTTCCGGT TAGCTTTATT GCTTGTTTTA TTTATGCTTA TCGGCGCTTT ATTCAATCAA GTTGTTATCG TAATGCTATT AGGCTCGATT GCATTACTTG TGTGGCATTA TCGTCAACTT ACTCGTTTAA ACTTCTGGTT ATGGAAAGAT AAAAAGCTTA CGCCTCCTCA AGGGCGTGGA AGCTGGGAGG GGGTATTCAA TGGAATATAT CGCCTGCAGG GCAAGAATCG CCGTCGAGTG GGTCAGTTAG CGACTTTATT AGCTCGTTTT CGTCAAGGCG CTGAGGCCTT ACCAGATGCG GCAGTAGTAC TTGATGCAGA ACATAATATC TTATGGTGTA ACAAGCTCGC TCAATTAATC TTAGGCTTTG TTTGGCCTCA AGATAATGGT CAGAGAATTG ATAACCTTAT TCGCCATCCT GATTTTTCGA CTTATATAAA GAAAGCACAA TACAAAGAAC CATTAGAAAT CCCTTCTCCG GTGTCAGATA AGCGATTACT TGAAATTCGA GTAATGAGCT ATGGCGATCG ACAATTGTTG TTAATTGCTC GAGATGTCAC TCGAATTCAT CAGTTAGAAG GTATGCGCAA AGATTTTGTG GCTAACGTTT CCCATGAACT TAAGACCCCA CTGACAGTAT TGCAGGGGTA TTTAGAAATT ATGCAAACCA TGGAAGACGC AGACTCTCCT AATCACAAAC CACTATCGTT GATGCAGCAA CAGACGACTC GAATGCAGTC GATGGTTGAG CAATTGTTGG CCCTGTCGCG CATTGAAGAT GCTGTGGATA TTGATTTATC GCAAACGGTC AATATGTCAT TGATGATGGA AATTCTTAAA GAAGAGGCCA AAGCCCTTGC TGGCACCGAC TATACATTAG TGTTTAATTG CGAACCGGGT TTGAATACCC ATGGCAATGA ATTGCAATTA CGCAGTGCTT GCTCCAACTT GATTTCAAAT GCAATACGTT ATACCAGCCC TGGTGGAACG ATTTCGGTTA ATTGGCAAAG TGTTGCAACC GGAGCGTTGT TTTCGGTGGC AGATACTGGG GTGGGTATCG CTCCACAACA TATTAACCGC TTAACTGAAC GCTTTTATCG AGTAGATAAT GCGCGTTCAA GTAAAACTGG TGGCAGTGGT TTAGGGTTAG CGATAGTAAA ACATGCTTTA AACCATCATC ACAGTGAGCT TAAGGTGACG AGTGAGTATG GCAAAGGCAG TATCTTCAGT TTTGTTATTC CATCGCACTT GTTAGTTCGG CAATAG
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Protein sequence | MFISYSGYRL FFRLALLLVL FMLIGALFNQ VVIVMLLGSI ALLVWHYRQL TRLNFWLWKD KKLTPPQGRG SWEGVFNGIY RLQGKNRRRV GQLATLLARF RQGAEALPDA AVVLDAEHNI LWCNKLAQLI LGFVWPQDNG QRIDNLIRHP DFSTYIKKAQ YKEPLEIPSP VSDKRLLEIR VMSYGDRQLL LIARDVTRIH QLEGMRKDFV ANVSHELKTP LTVLQGYLEI MQTMEDADSP NHKPLSLMQQ QTTRMQSMVE QLLALSRIED AVDIDLSQTV NMSLMMEILK EEAKALAGTD YTLVFNCEPG LNTHGNELQL RSACSNLISN AIRYTSPGGT ISVNWQSVAT GALFSVADTG VGIAPQHINR LTERFYRVDN ARSSKTGGSG LGLAIVKHAL NHHHSELKVT SEYGKGSIFS FVIPSHLLVR Q
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