Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2760 |
Symbol | |
ID | 4279666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3316482 |
End bp | 3317513 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135579 |
Product | dTDP-glucose 4,6-dehydratase |
Protein accession | YP_751439 |
Protein GI | 114563925 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0786676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATATA AAAACGGACA AGCACTCACA ATCTTGATTA CTGGTGGTTG TGGGTTTATT GGTTCTGCAT TAATCCGATT TATCCTAGGC TTTACGAATC ACAGCGTCAT TAATATCGAT AAACTGACAT ATGCCGCTAA TCCTCAAAGC CTTAAGATGA TAAATAAAAG TGAACGATAT CATTTCATCG AAGGTGATAT CTGTAATGGC ACATTATTAA CAGAAGTGTT TAATCGGTTT CAACCCGATG CCGTGATGCA TTTGGCGGCG GAGACTCATG TTGATCGATC CATTTCAGGC CCAGCTGAAT TTATTCAAAC CAATATAGTA GGCACGTATC AACTACTAGA AGCCAGCAGG CAATTTTATA ATGGCTTATC TAGCGATAAG GCTAGGCAAT TTCGTTTTCA CCATATTTCG ACAGATGAAG TGTTCGGAGA TTTACCCGAT ACCGGATATT TCAATGAACA AAGCGCCTAC TCCCCAAGTT CGCCATATTC CGCAAGTAAG GCATCAAGTG ATCACCTAGT GAAAGCTTGG CATCGAACCT ATGGTTTACC AACTTTGATC AGTTATTGCT CAAATAATTA TGGCCCATAC CAACATCCTG AAAAACTTAT CCCGCTCACC ATTACCCGCG CCCTTGCGGG TAAAATAATT CCTATTTATG GTAATGGCCA ACAAGTTCGA GACTGGCTTT ATGTTGATGA TCACGTTGAA GCGTTAATCA CAATATTAAC CTTAGGTAAC GTGGGTGAAA CTTATACTGT TGGCGGTAAT AATGAGCAAA CTAATATTCA GGTTGTGGCA TCAATTTGCC AACAACTAAC CCAATTAGTG CCGAATCATC AGTTGGCAAG TAGCAATGGT TTTTCCTCAC TCATTCAACA TATTACTGAT AGACCAGGAC ACGATCGCCG CTATGCTATT GATGCGAGTA AATTGACTAC TACATTGCAT TGGACACCAA AACATAACTT CTCGGATGGT TTACGCCAAA CCGTTCAGTG GTATTTGGCT CACTATCAAT GA
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Protein sequence | MTYKNGQALT ILITGGCGFI GSALIRFILG FTNHSVINID KLTYAANPQS LKMINKSERY HFIEGDICNG TLLTEVFNRF QPDAVMHLAA ETHVDRSISG PAEFIQTNIV GTYQLLEASR QFYNGLSSDK ARQFRFHHIS TDEVFGDLPD TGYFNEQSAY SPSSPYSASK ASSDHLVKAW HRTYGLPTLI SYCSNNYGPY QHPEKLIPLT ITRALAGKII PIYGNGQQVR DWLYVDDHVE ALITILTLGN VGETYTVGGN NEQTNIQVVA SICQQLTQLV PNHQLASSNG FSSLIQHITD RPGHDRRYAI DASKLTTTLH WTPKHNFSDG LRQTVQWYLA HYQ
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