Gene Sfri_2757 details

Gene Information

• Locus tag: Sfri_2757
• ID: 4279663
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 3314537
• End bp: 3314968
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638135576
• Product: hypothetical protein
• Protein accession: YP_751436
• Protein GI: 114563922
• COG category: [M] Cell wall/membrane/envelope biogenesis; [P] Inorganic ion transport and metabolism
• COG ID: [COG3015] Uncharacterized lipoprotein NlpE involved in copper resistance

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAATT TATGGATAAT GATCGCATTA ATAATCGTCG GTTGCGGCCA ACAAGACATC 
TCAACTATAG ATACCACTTC AAGTAGTAAA ACAACTTTGC AATGGCAAGG TGTATATCAT 
GGTGTATTCC CTTGTCCGAG TTGTGATGGG ATGGATACCA CTCTTGAACT AACCCAACCG 
AACCAATATA CCATCCACAC AATTCGTTTA GGCACTGATC CCAATCCTTA TCGTGGTAGT 
GGAACATTCA AATGGGATCA AAGCGGTAAT ATTATCATTT TAGATCGTGG GCATATTTAT 
CAAGTCTATT CCGATCATTT ATATTTGTTA GATGTAAAAT TTAGGCGAAT TAAAGGCCCA 
GACGCAGATC GATACAGGGT CGATAAAATC GAAGGACTAG GCCAGCAAAT ATCCCCCCCC 
AACGCTGAAT AA 

 

Protein sequence

MKNLWIMIAL IIVGCGQQDI STIDTTSSSK TTLQWQGVYH GVFPCPSCDG MDTTLELTQP 
NQYTIHTIRL GTDPNPYRGS GTFKWDQSGN IIILDRGHIY QVYSDHLYLL DVKFRRIKGP 
DADRYRVDKI EGLGQQISPP NAE