| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2742 |
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| Symbol | |
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| ID | 4279648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3295126 |
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| End bp | 3296619 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638135561 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_751421 |
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| Protein GI | 114563907 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGGA GTACGGCTCT GCCCTTGTTG ATCCTCGCCA GCTCTTTCTT GCCGGGGCTG
ATAATTTTCT GCTTGCCCGA GGATCGTGTC GTCACCCGCA CAATGCTTAA TCTGGCAGGT
GCGCTATTTA AGATTGTGCT GGTCGGGGGA ATGTTTTGGG GCATATTACA TGGCTATCAT
TTTGAGGCTC GTCTAACCCT CTTACCAGGA CTCGATTTGG TTCTGCGTTC TGGCCCATTG
GCGATGCTTT TCGTGACACT TTCTTCCGGA CTGTGGCTGG TCACTACCGT TTATGCCGTT
GGATATCTGG AGGGTTCACC TCATCGCAGC CGCTTTTTTG GCTTCTTCAG TCTGTGTGTT
ACTGCCACGA CAGGTGTTGC CCTTGCGGGG AATTTGATTA CCTTCCTGCT GTTTTATGAA
CTACTTACTC TTTGCACTTA CCCACTGATC GTACACCGCG GAACCGAAAT CGCACGCCAG
GCCGGCAGAA ATTACCTTAT CTACACTATC ATCGGGGGCG CATTGCTACT GCTATCTTCT
GTGTGGTTGT ATACGCTTGC CGGCACTCTG GAGTTCACCG ACCGCGGCTT TTTGTCCGGG
CTTGATGCCT CTTTGCACCC AACACTGATG ATAATCTTCT GCTTGTTGAT TGCCGGATTG
GGGGTAAAAG CGGCTTTGGT CCCCCTACAT GGCTGGTTAC CTCAGGCCAT GGTTGCCCCA
GCGCCTGTAA GTGCGCTGCT GCACGCCGTG GCAGTGGTGA AGGCGGGCGC ATTCGGCATA
ATACGGGTTG TTTACGATGT GTATGGCATT GAGTTTGCCA ACAGTTTGGG GCTAACCTTA
CCCCTAGCAA TACTGGCTGC TGTAACCATA ATTTATGGCT CGCTGCGCGC CTTATTTCAG
GACGAACTTA AACGTCGACT CGCATTTTCT ACAGTCAGCC AAGTGTCCTA TATAGTGCTA
GGCATAGCGC TTGCCAGTCC TATCGCGACG CTGGGAGGAC TGATCCACCT GGTGCATCAG
GGAGTGCAAA AAATCACCCT TTTTATGTGC GCAGGTAACC TCGCCGAGAC CCTAGGGATT
CATAAAATCA GCGAGATGAA CGGGGTCGGA CGTCGGATGC CTTGGACCAT GGCGGCATTC
ACCATTGGTG CCTTCGGTAT GATAGGTGCC CCGCCGCTCG CAGGTTTTTT TAGCAAATGG
TATCTAGGAC TGGGGGCATT GGACGCAGGA CAAGGCTGGG TGATATATGT TCTGGCGGTA
AGTAGTGCCC TCAATGCCGC CTACTTTTTA CCCATATTGT ATACTGCTTG GTTTAAGGCC
CCTCCCGATA GCTGGCCGGC CGAACGATCT TTTGGAAACA AAGAGACGGC TTGGACATTA
CTTGTCCCCC CCATAGTTAC TGCACTGTTG ACATTGGCTT TGGGGCTTTT GGCATTTGCA
CCGTTTAACC TATTGGAATG GACTCGATTA ATTGTGAGTC GAGGATTTGC CTAA
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| Protein sequence | MNWSTALPLL ILASSFLPGL IIFCLPEDRV VTRTMLNLAG ALFKIVLVGG MFWGILHGYH
FEARLTLLPG LDLVLRSGPL AMLFVTLSSG LWLVTTVYAV GYLEGSPHRS RFFGFFSLCV
TATTGVALAG NLITFLLFYE LLTLCTYPLI VHRGTEIARQ AGRNYLIYTI IGGALLLLSS
VWLYTLAGTL EFTDRGFLSG LDASLHPTLM IIFCLLIAGL GVKAALVPLH GWLPQAMVAP
APVSALLHAV AVVKAGAFGI IRVVYDVYGI EFANSLGLTL PLAILAAVTI IYGSLRALFQ
DELKRRLAFS TVSQVSYIVL GIALASPIAT LGGLIHLVHQ GVQKITLFMC AGNLAETLGI
HKISEMNGVG RRMPWTMAAF TIGAFGMIGA PPLAGFFSKW YLGLGALDAG QGWVIYVLAV
SSALNAAYFL PILYTAWFKA PPDSWPAERS FGNKETAWTL LVPPIVTALL TLALGLLAFA
PFNLLEWTRL IVSRGFA
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