| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2741 |
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| Symbol | |
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| ID | 4279647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3293681 |
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| End bp | 3295129 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638135560 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_751420 |
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| Protein GI | 114563906 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.405496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGTTAA TTTTGGAGCA AATCCCGTGG ATTGTGATGC CGATCATCTT CCCCTTGATA
GGGAGTATGG CTTGCTTCCT GTTTCCGGCA AAAGCGAAGT CACTGGGTCT GCTGACTTCC
TTGGTTGTTT TGGCATGTGT CACTAGGCTC GGCTGGCAAC TCAAAGCACT AGGATCGCTG
CGCTACCCTA TGGGTGGTTG GGGGGCGCCA TTGGGCATCG ACCTTTACGC AGATGGTCTG
AGTCTACTAA TGCTATTGAT GGCGGCACTG GTAGGTTTAG GTATCAGCAT CTATTCCAGC
AGTTATTTCA GTCGCGACAA AGCGAGGCAT TTTTGGCCGT TGTGGTTATT CCTGTGCGGG
GCGCTCAATG CATTGTTTCT GTCAGCAGAT ATCTTCAATC TCTATGTCAC ACTGGAATTA
CTGGGATTAA CGGCAGTGGC CCTTGTGGCA TTAGCAGGTG GCGCCGACGC CTTGATTGCA
GCAATGCGTT ATCTATTGGT AAGCCTACTG GGCTCCTTGT TCTATCTGTT GGGCGTTGCC
CTTATCTACC ACAGTGTTGG TAGTCTGGAC ATTGCAATAC TAGCACAACG AGTAGAACCG
TCACCTGCGA TGTGGGCGGC GGTGGGATTG ATAAGTACCG GCCTACTGCT CAAAACAGCG
CTTTTCCCAA TGCATTTTTG GTTACCGCCC GCCCATGCTT CAGCCCCAGC CCCCGTGAGT
GCGCTTATGT CCGCATTGGT GGTCAAAGCT TCCTTCTATA TTCTGCTACG CATGTGGCTG
GAGTTCTTTC AAACGCAGGG GGGGGCATTT GCTAATTTTC TCGGACTGCT CGGCGCCGCG
GCCGTCCTTT GGGGCGGAAT TCAAGCACTG CGCCAAACAC GGCTAAAATT ACTTATTGCC
TACTCGACAG TATCGCAACT GGGCTATCTG TTTTTGGCTT TTCCGTTGGG GACGAGCATT
GCCTGGAAGG GAGCACTATA TATGTTATTT TCCCATGCTA TGGCTAAGGC GGCGATGTTC
ATGGCGGCGG GTAATATTCA GTTTTTTGCG GGACATGACC GCATAGCGGA GCTCGGCTCA
ATAACCCAAC GTCTGCCACT GACATTGACG GCATTCGCCC TAGCTGGTAT CAGCCTTATG
GGGCTACCGC CAAGTGGAGG GTTCATTGGC AAGTGGTTAT TACTGCAGGC ATCAATAGAA
TCCGGACAGT GGTGGTGGGG AATTATTCTG CTCCTTGGTG GATTTCTGGC CACTGGCTAT
GTATTCAAAG TCATTGCTCA TGTGTTTACT CATGACGAAC CAACAAGCCG AACGGTAACA
CTACCGGCCA CGATGGAGTG GAGCGCTTTA GGGTTGGCTT TAATAGCAGT GCTCTTGGGC
TTGTTCACAT ACTGGCCGTT GGCAATGTTA GAAATGGGTT CCCCCTTTGG CACAGGACAT
AGCGGATGA
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| Protein sequence | MELILEQIPW IVMPIIFPLI GSMACFLFPA KAKSLGLLTS LVVLACVTRL GWQLKALGSL
RYPMGGWGAP LGIDLYADGL SLLMLLMAAL VGLGISIYSS SYFSRDKARH FWPLWLFLCG
ALNALFLSAD IFNLYVTLEL LGLTAVALVA LAGGADALIA AMRYLLVSLL GSLFYLLGVA
LIYHSVGSLD IAILAQRVEP SPAMWAAVGL ISTGLLLKTA LFPMHFWLPP AHASAPAPVS
ALMSALVVKA SFYILLRMWL EFFQTQGGAF ANFLGLLGAA AVLWGGIQAL RQTRLKLLIA
YSTVSQLGYL FLAFPLGTSI AWKGALYMLF SHAMAKAAMF MAAGNIQFFA GHDRIAELGS
ITQRLPLTLT AFALAGISLM GLPPSGGFIG KWLLLQASIE SGQWWWGIIL LLGGFLATGY
VFKVIAHVFT HDEPTSRTVT LPATMEWSAL GLALIAVLLG LFTYWPLAML EMGSPFGTGH
SG
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