| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2733 |
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| Symbol | |
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| ID | 4279639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3287731 |
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| End bp | 3288387 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638135552 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_751412 |
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| Protein GI | 114563898 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACTGA CCAGAGAACA ACTCGCCCAG CGCGTAGCAA AAGAATTACA AGACGGTTTT
TACGTTAATT TAGGAATTGG GATCCCTACC CTTGTGGCTA ACTATATTCC TCAAGGCATG
CAAGTGATGC TGCAATCTGA AAACGGTTTA CTCGGCATGG GCGAGTTTCC GACAGAAGAA
AACATTGATG CCGACCTTAT CAACGCCGGC AAACAAACGG TTACCGCAGT GGCTGGCGCG
TCATTCTTTT CATCAGCAGA AAGCTTTGCG ATGATCCGTG GCGGCCACGT AGATCTCACC
GTGTTAGGCG CATTTGAAGT TGATGTTAAC GGCTCTATCG CCTCATGGAT GATCCCAGGA
AAACTGATTA AAGGCATGGG CGGTGCAATG GATTTAGTCG CTGGCGCTGA TAATATTATT
GTCACCATGA TGCATGCAGA CAAATACGGT AATTCAAAAT TATTATCAAA ATGTGAACTG
CCATTAACCG GTTATGGTTG CATTAAACGT GTAATGACAG ATTTGGCCTT TATGGAAATT
AAAGATGGCG CATTCCATTT ACTTGAACGT GCCCCTGGCG TGTCTGTTGA AGAGATCGTC
ACAAAAACAG CCGGTAAGCT AGTGGTGCCT GAGCATGTGC CTGAAATGAC CTTTTAA
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| Protein sequence | MALTREQLAQ RVAKELQDGF YVNLGIGIPT LVANYIPQGM QVMLQSENGL LGMGEFPTEE
NIDADLINAG KQTVTAVAGA SFFSSAESFA MIRGGHVDLT VLGAFEVDVN GSIASWMIPG
KLIKGMGGAM DLVAGADNII VTMMHADKYG NSKLLSKCEL PLTGYGCIKR VMTDLAFMEI
KDGAFHLLER APGVSVEEIV TKTAGKLVVP EHVPEMTF
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