Gene Sfri_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2729 
Symbol 
ID4279635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3283210 
End bp3284022 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content47% 
IMG OID638135548 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_751408 
Protein GI114563894 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCAA ACCAATATAA GTTCATTGAA TGCCGCCTAG AACAAGGGGT GGCAGAGCTC 
ATTTTAAACC GAGTTGAAGT ACATAATGCC TTTGATGAAG TGATGATCAG CGAGATGATC
CAGGCTATCG AACACTTTGC CAAAGACAGT CAATGCAATA TGTTGATATT ACGTGCTAAT
GGCAAAAATT TTAGTGCTGG CGCCGACCTC AATTGGATGC GCAAACAAGC ACTGATGGAC
TTTGACCAAA ACCTGACTGA TGCCCACCAG CTTGCCAAGC TGATGCATGT GTTAGACAAG
TTTCCAAAGC CAACTATTGC CTTAGTACAA GGCGCAGCCT TTGGTGGTGC ATTAGGGCTG
ATTTGCTGCT GCGATATTGC CATTGCCAAC ACTCGCGCCA GTTTTTGTTT AAGCGAAGTG
AAGCTAGGGC TTATCCCTGC TGTGATAAGT CCGTATGTGA TTCGAGCCAT GGGTAATCGC
CAATCACGCC GCTTTATGCT GACCGCTGAA CGCTTTAGTG CTGACGTAGC CTTAACTCAT
CAAGTCATTC ACGAAGTTAA CGACGACTTA GATGCTGCTG CGGCCCCCTT CATCGCAGCA
TTTAATGCCA ATAGCCCTCA GGGCATGGCA TGGGCAAAGA ATCTCGTATC GCATTTAGAA
AACGGCGTGA TTGACGACGC TACGCTCAAT TTTACCAGCG AGCAAATTGC TCGTATTCGT
GTATCAGATG AAGGTCAAGA AGGCCTTAAT GCTTTCTTTG AAAAACGCAC GCCTACATGG
CAAGCCGCTA AACCTGATCC ACAAGGAGCC TAA
 
Protein sequence
MFSNQYKFIE CRLEQGVAEL ILNRVEVHNA FDEVMISEMI QAIEHFAKDS QCNMLILRAN 
GKNFSAGADL NWMRKQALMD FDQNLTDAHQ LAKLMHVLDK FPKPTIALVQ GAAFGGALGL
ICCCDIAIAN TRASFCLSEV KLGLIPAVIS PYVIRAMGNR QSRRFMLTAE RFSADVALTH
QVIHEVNDDL DAAAAPFIAA FNANSPQGMA WAKNLVSHLE NGVIDDATLN FTSEQIARIR
VSDEGQEGLN AFFEKRTPTW QAAKPDPQGA