| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2727 |
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| Symbol | |
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| ID | 4279633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3280306 |
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| End bp | 3281475 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135546 |
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| Product | isovaleryl-CoA dehydrogenase |
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| Protein accession | YP_751406 |
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| Protein GI | 114563892 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT TATATACCAG TTTAAACTTC GGTTTAGGTG AAGATGTTGA CATGTTACGT
GACGCCGTTC GTGGTTTTGC CGCCAACGAA ATTGCCCCCA TGGCCGCCCA AGTCGATATC
GACAATGAGT TCCCTAATCA GTTATGGCCA GTACTTGGCG AGATGGGTTT ATTAGGTGTT
ACTGTTGATG AGCAATATGG CGGCGCTAAC ATGGGCTATC TTGCTCACGT TGTCGCAATG
GAAGAAATCT CCCGCGCATC AGCCTCTATT GGGTTAAGTT ATGGTGCTCA CTCAAACTTA
TGTGTGAACC AAATTAACCG TAACGGTAAT GACGCTCAAA AAGCTAAATA CTTACCTAAA
CTAGTCAGTG GCGAACACAT TGGTGCACTT GCCATGAGCG AACCCAATGC CGGTTCTGAT
GTAGTGTCAA TGAAACTGCA TGCTCGCAAA GAAGGCGATC GTTACATCCT TAACGGCAAT
AAAATGTGGA TCACTAACGG GCCTGATGCC CATACCTATG TTATTTACGC CAAGACCGAC
TTAGAAAAAG GCGCTCATGG CATTACCGCA TTTATCGTTG AGCGTGGATC GAAAGGATTT
AGCCAAGCAC AAAAACTCGA CAAGCTAGGT ATGCGCGGTT CGAACACCTG TGAATTGGTG
TTTGAAGACT GTGAAGTGCC AGAAGAAAAC ATCTTAGGCG GCCTCAATAA TGGCGTAAAA
GTGTTAATGA GTGGCCTTGA TTATGAACGT GTAGTGTTGT CTGGTGGCCC ATTGGGCATT
ATGTCTGCTT GTATGGACAT AGTGGTGCCA TACATTCATG AACGCGAACA GTTTGGTAAG
TCAATTGGTC AATTCCAACT AGTGCAAGGC AAGTTAGCCG ATATGTACAC GGGTATGAAC
GCTGCCCGCG CTTATGTTTA CAGTGTGGCT AAATCTTGTG ACCGTGGTGA AACCACTCGT
AAAGATGCCG CTGGCGCTAT TTTGTACAGT GCAGAACTTG CCACTAAAAT GGCCTTAGAT
GCCATTCAAT TACTGGGCGG AAATGGCTAT GTGAATGAAT ACGCAACTGG CCGTTTATTA
CGTGATGCTA AGCTTTACGA AATTGGTGCA GGCACCTCAG AAATTCGCCG TATGTTAATT
GGTCGTGAGC TGTTTAACGA ATCAAAATAA
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| Protein sequence | MSDLYTSLNF GLGEDVDMLR DAVRGFAANE IAPMAAQVDI DNEFPNQLWP VLGEMGLLGV
TVDEQYGGAN MGYLAHVVAM EEISRASASI GLSYGAHSNL CVNQINRNGN DAQKAKYLPK
LVSGEHIGAL AMSEPNAGSD VVSMKLHARK EGDRYILNGN KMWITNGPDA HTYVIYAKTD
LEKGAHGITA FIVERGSKGF SQAQKLDKLG MRGSNTCELV FEDCEVPEEN ILGGLNNGVK
VLMSGLDYER VVLSGGPLGI MSACMDIVVP YIHEREQFGK SIGQFQLVQG KLADMYTGMN
AARAYVYSVA KSCDRGETTR KDAAGAILYS AELATKMALD AIQLLGGNGY VNEYATGRLL
RDAKLYEIGA GTSEIRRMLI GRELFNESK
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