Gene Sfri_2726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2726 
Symbol 
ID4279632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3279770 
End bp3280180 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content41% 
IMG OID638135545 
Producttranscriptional regulator, MerR family protein 
Protein accessionYP_751405 
Protein GI114563891 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.505695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAA CCCACATTCC TCAATCAACA TATTCAATCA GTGACTTATC AAAAGAATTT 
GATATCACCA CCCGCAGTAT TCGTTTTTAC GAAGACCAAG GCTTGATTAA ACCTAAGCGT
CGCGGGCAAA CCCGAATTTA CAGCCTGAAA GACCGAGTGC GCTTAAAACT TATTTTACGC
GGCAAACGCC TTGGTTTTTC GTTAGCAGAA ACACGACGTT TATTTGAACT TTACGACGCG
GATAAAAGCA GCTCAACTCA ACTACAAACT ATGCTTGATT TAGTGAACGA GAAAAAATCA
GCTCTTCAAC AACAAATGGA CGACATTAAA GTCGTGCTAA TGGAGCTAAA TTCAGCCGAA
CAACAGTGCA AAGCGGCATT AGCCGACAAT TCGACTAAGA AAGCCAAATA A
 
Protein sequence
MSTTHIPQST YSISDLSKEF DITTRSIRFY EDQGLIKPKR RGQTRIYSLK DRVRLKLILR 
GKRLGFSLAE TRRLFELYDA DKSSSTQLQT MLDLVNEKKS ALQQQMDDIK VVLMELNSAE
QQCKAALADN STKKAK