Gene Sfri_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2723 
Symbol 
ID4279629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3274788 
End bp3275681 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content44% 
IMG OID638135542 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_751402 
Protein GI114563888 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCTA GCTCAATGCA ATCATGGTTT ATGGCTATCC GTCCTCGTAC GTTACCGGCG 
GCAATCGGTC CATTATTAAT TGGAAACATG CTCGCGATTG GGCTCGAACA ATTTAGCTTA 
CTCATCGCCT TCACCTCAAT GCTATGTGCG GTATTATTGC AAATTTCAGT TAATCTCGCT 
AATGACTACT TTGACTTTAA GAATGGTATC GACACCGAAG AGCGTCTCGG TCCAATAAGA 
GTCACTCAAA GCGGCATACT TGCGCCTTCA TCAGTACGAA ACGCCATGAT CGGTTGCCTT 
ATTACATCAC TATTAGTGGG TTCATTACTG ATCGTTCACG GTGGCTGGCC CATTGCCATT 
CTTGCAGCAG CCTCTATATT GGGCGCGTTG TGTTATAGCG GAGGCCCCTA CCCACTTGCG 
TCACATGGAT TAGGTGAAAT TGCTGCATTT GTATTTTTCG GCTTAGTCGC CGTTGTTGGC 
AGTTACTATT TACAAGCAGG CACCACCACC ATGACAGCGT GGTTACTAGG CTGTGCTATT 
GGCTTTTTTA ATGCGGCCAT CATGCTAGTC AACAATACTA GAGACATTTC TACCGACACT 
AAAGCAGGTA AAAATACCCT TGCGGTACGA ATTGGTGAAG CACAAGCTAA AGTGTTGTAC 
CAAAGTTTTG TCTATTTACC ATTTGGTATC ATTATCGCGG GATTCCTGCT CGGGTCACTC 
GATGGATTAC CTGTATTATT ATCGGGAACA TCATTAATCA TTGCGCGTAA TCTCAGCCGC 
GAATTTTACG ATAACTCAGG TGAAGCATTA AATCCGATCC TTGGACAAAC AGCTAAATTG 
ACGATGATTT TTAGCGTCTT ATTTAGCATT GGATTGTACT TTTCGCTGAC CTAA
 
Protein sequence
MQPSSMQSWF MAIRPRTLPA AIGPLLIGNM LAIGLEQFSL LIAFTSMLCA VLLQISVNLA 
NDYFDFKNGI DTEERLGPIR VTQSGILAPS SVRNAMIGCL ITSLLVGSLL IVHGGWPIAI 
LAAASILGAL CYSGGPYPLA SHGLGEIAAF VFFGLVAVVG SYYLQAGTTT MTAWLLGCAI 
GFFNAAIMLV NNTRDISTDT KAGKNTLAVR IGEAQAKVLY QSFVYLPFGI IIAGFLLGSL 
DGLPVLLSGT SLIIARNLSR EFYDNSGEAL NPILGQTAKL TMIFSVLFSI GLYFSLT