| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2719 |
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| Symbol | |
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| ID | 4279625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3270601 |
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| End bp | 3271974 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135538 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family protein |
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| Protein accession | YP_751398 |
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| Protein GI | 114563884 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTCAAA TACAAGACAT CAATAATTAT CAAGTCATTA TTGTTGATGA TGAACCTCAT
ATCGGTATCG TATTACAGCA ATTATTTAAA CTAGAGAATA TCAGCGCGCT GGCGATTACG
AACCCGCAAT ATATAGCTAA CCAAATAACC GCTAACTGGC CAGGCATAGT GATTTCTGAT
GTCAATATGC CGCAACTCGA TGGCTTGAGT TTATTGCAAC AACTGAAAAA ACAAGACAAT
GACTTACCTG TAGTACTATT AACGGGTTTT GGTGATATCG CCATGGCGGT AGACGCACTC
AAAAAAGGTG CTTACGACTT TATCGAAAAA CCATTTAACA ACGAACATAT ACTCGATGTG
ACCAAACGTG CATTAGATAA ACGTGCGCTA ACACTTGAGA ACCGTAAACT TAAACGCGAA
CTTGAATCGC ACATAGCACC TGGCCCACGT ATTTTAGGCA GTAGTCCTGG TGTAATGAAA
ATGCGCCACC TTATTGACCA AGTGCTAGAC ACACCGGCAG ATATCATGAT TGAAGGTGAA
ACAGGCGCAG GTAAAGAACT TGTCGCCCGA TATCTGCATG ACCACAGCTA TCGTAACAAA
GCCAATTTTG TCGCCATTAA TTGCGGTGCA ATCCCTGAAA ACCTCATTGA AAGTGAACTC
TTTGGTGCTG AATCGGGTGC TTTCACTGGC ATAGACAAAC GCCGGATTGG TAAGTTTGAA
TATGCTAATG GTGGCACGCT ACTTCTAGAT GAAATAGAAA GCACTCCTAT GGCTTTACAG
GTTAAATTAC TGCGAGTGTT GGAAGATCGT AAAGTCGAAC GATTAGGATC AAATACACCG
ATAAATTTAG ACATAAGAGT TATTGCCGCA ACAAAATTAA ACTTGCAACA ACTGTGTGAA
GAAGGGAAAT TCAGACAAGA TTTATTGTAC CGACTTAACC TGGTGACCAT TGTCATCCCT
CCACTACGAG ATCGCCGAGA AGACATTCCA TTACTGTTTT TACATTTTGC CAGAATTGCT
TCTGCTCGTT ACCATAAAGC ACTCATTGCA TTAAATCCCC AGCAAACCAT GGTGCTAACC
TCTCACGACT GGCCAGGCAA TGTACGCGAG TTGCGCAACT TAGCAGAGCG TTATGTATTA
CTGGGTGCAG AAGCCGCTTT TGCGGGCAAT TTAGACAGCC ACACGACTAT GCACACTAGC
ATGTCACTTC AACAACGAGT TGAGTTCTTT GAGAGGATGT TGATTGAAGA AGCTTTAAGC
CATAACAAAG GCAGTATTAA GCTAACAATG GAGCAGCTCG AATTACCGCG TAAGACCTTG
TACGACAAAA TGCGCAAGTT TGACTTAGAC CGTAAACAAT TTATCGAGAG CTAA
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| Protein sequence | MTQIQDINNY QVIIVDDEPH IGIVLQQLFK LENISALAIT NPQYIANQIT ANWPGIVISD
VNMPQLDGLS LLQQLKKQDN DLPVVLLTGF GDIAMAVDAL KKGAYDFIEK PFNNEHILDV
TKRALDKRAL TLENRKLKRE LESHIAPGPR ILGSSPGVMK MRHLIDQVLD TPADIMIEGE
TGAGKELVAR YLHDHSYRNK ANFVAINCGA IPENLIESEL FGAESGAFTG IDKRRIGKFE
YANGGTLLLD EIESTPMALQ VKLLRVLEDR KVERLGSNTP INLDIRVIAA TKLNLQQLCE
EGKFRQDLLY RLNLVTIVIP PLRDRREDIP LLFLHFARIA SARYHKALIA LNPQQTMVLT
SHDWPGNVRE LRNLAERYVL LGAEAAFAGN LDSHTTMHTS MSLQQRVEFF ERMLIEEALS
HNKGSIKLTM EQLELPRKTL YDKMRKFDLD RKQFIES
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