Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2714 |
Symbol | gltX |
ID | 4279620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3261885 |
End bp | 3263294 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135525 |
Product | glutamyl-tRNA synthetase |
Protein accession | YP_751393 |
Protein GI | 114563879 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000169422 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACTA AGACGCGTTT TGCTCCAAGT CCAACTGGTT TTCTTCATGT AGGTGGTGCT CGTACAGCAC TTTATTCATG GTTGCACGCA CGTGCTAACA ATGGTGAATT TGTACTTCGT ATTGAAGACA CTGATATTGA ACGTTCAACT CAAGAAGCAT GTGATGCCAT TCTTGACGGT ATGAACTGGT TAGGTTTGAC TTGGGATGAA GGTCCTTATT ACCAAACTAA ACGTTTTGAT CGTTACAATG AAATTATTGA GCAAATGCTA GACAAAGGCA CTGCATACAA ATGCTATTGC TCGCGTGAAC GCATTGAGAG CATGCGTGAA GACCAAGCTG CGCAAGGTTT ACAACAGAAA TACGACGGTT GTTGTCGTAA CCTTGCGCCT CGTGACACTG ACGAACCTTT TGTCATTCGC TTTAAAAACC CAATTGAAGG CAGTGTTATA TTTGATGATC ACGTTCGTGG TCGAATCGAA ATTTCTAACG ATATGCTTGA TGATTTAATC ATTAAGCGTA CCGATGGTGT ACCAACCTAT AATTTCTGTG TTGTAGTAGA TGACTGGGAC ATGGGTATTA CCTGCGTTGT ACGCGGTGAA GATCATATCA ATAATACGCC ACGCCAAATC AACATACTTA AAGCATTAGG CGCACCGATC CCTGAATATG CCCATGTGTC GATGATTCTA GGTGACGATG GCGCCAAGCT ATCTAAACGT CATGGTGCTG TGGGCGTTAT GCAATACCGT GATGACGGGT ATCTACCAGA AGCACTATTA AACTATCTTG TTCGCTTAGG TTGGTCTCAT GGCGATCAAG AAATATTTTC AATGGAAGAG TTGAAAACGC TGTTTAAGTT AGATGATATC AATAAAGCTG CTTCAGCTTT TAATACTGAT AAGCTTATTT GGTTAAACCA ACATTATATC AAGTCTCTCG ATCCTGTTTA TGTCGCATCA CATTTACAAT GGCATATGGA TGATCAGAAA ATTGATACTA GCAATGGTCC AGCGTTAACT GAAATTGTTA CAGCATTATC AGAACGAGCG AAAACATTAA AAGAATTAGC CGCTTCAAGC CGTTACTTCT ATGAAGATTT TGATAACTTC GATGAAGCAC AAGCTAAGAA GCATCTACGT GGCGTGGCAC TAGAGCCTTT AACATTGTTC AATCAAAAGT TATCTGAACT AAATGATTGG AGCGTAGAGA ATATTCACAA CGTTATTGAA GCCACAGCGA CAGAACTTGA TGTCGGCATG GGTAAAGTAG GTATGCCTTT ACGCGTTGCG GTTACTGGCG CAGGACAGTC TCCTGCATTA GATTTAACCT TGTTCTTAAT CGGAAAAGAA AGATCTGCAC AAAGAATATC CAAAGCGATT GAATTTGTAG CAGATAGAAT AAATTCCTAA
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Protein sequence | MTTKTRFAPS PTGFLHVGGA RTALYSWLHA RANNGEFVLR IEDTDIERST QEACDAILDG MNWLGLTWDE GPYYQTKRFD RYNEIIEQML DKGTAYKCYC SRERIESMRE DQAAQGLQQK YDGCCRNLAP RDTDEPFVIR FKNPIEGSVI FDDHVRGRIE ISNDMLDDLI IKRTDGVPTY NFCVVVDDWD MGITCVVRGE DHINNTPRQI NILKALGAPI PEYAHVSMIL GDDGAKLSKR HGAVGVMQYR DDGYLPEALL NYLVRLGWSH GDQEIFSMEE LKTLFKLDDI NKAASAFNTD KLIWLNQHYI KSLDPVYVAS HLQWHMDDQK IDTSNGPALT EIVTALSERA KTLKELAASS RYFYEDFDNF DEAQAKKHLR GVALEPLTLF NQKLSELNDW SVENIHNVIE ATATELDVGM GKVGMPLRVA VTGAGQSPAL DLTLFLIGKE RSAQRISKAI EFVADRINS
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