| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2714 |
|---|
| Symbol | gltX |
|---|
| ID | 4279620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 3261885 |
|---|
| End bp | 3263294 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638135525 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_751393 |
|---|
| Protein GI | 114563879 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000169422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACTA AGACGCGTTT TGCTCCAAGT CCAACTGGTT TTCTTCATGT AGGTGGTGCT
CGTACAGCAC TTTATTCATG GTTGCACGCA CGTGCTAACA ATGGTGAATT TGTACTTCGT
ATTGAAGACA CTGATATTGA ACGTTCAACT CAAGAAGCAT GTGATGCCAT TCTTGACGGT
ATGAACTGGT TAGGTTTGAC TTGGGATGAA GGTCCTTATT ACCAAACTAA ACGTTTTGAT
CGTTACAATG AAATTATTGA GCAAATGCTA GACAAAGGCA CTGCATACAA ATGCTATTGC
TCGCGTGAAC GCATTGAGAG CATGCGTGAA GACCAAGCTG CGCAAGGTTT ACAACAGAAA
TACGACGGTT GTTGTCGTAA CCTTGCGCCT CGTGACACTG ACGAACCTTT TGTCATTCGC
TTTAAAAACC CAATTGAAGG CAGTGTTATA TTTGATGATC ACGTTCGTGG TCGAATCGAA
ATTTCTAACG ATATGCTTGA TGATTTAATC ATTAAGCGTA CCGATGGTGT ACCAACCTAT
AATTTCTGTG TTGTAGTAGA TGACTGGGAC ATGGGTATTA CCTGCGTTGT ACGCGGTGAA
GATCATATCA ATAATACGCC ACGCCAAATC AACATACTTA AAGCATTAGG CGCACCGATC
CCTGAATATG CCCATGTGTC GATGATTCTA GGTGACGATG GCGCCAAGCT ATCTAAACGT
CATGGTGCTG TGGGCGTTAT GCAATACCGT GATGACGGGT ATCTACCAGA AGCACTATTA
AACTATCTTG TTCGCTTAGG TTGGTCTCAT GGCGATCAAG AAATATTTTC AATGGAAGAG
TTGAAAACGC TGTTTAAGTT AGATGATATC AATAAAGCTG CTTCAGCTTT TAATACTGAT
AAGCTTATTT GGTTAAACCA ACATTATATC AAGTCTCTCG ATCCTGTTTA TGTCGCATCA
CATTTACAAT GGCATATGGA TGATCAGAAA ATTGATACTA GCAATGGTCC AGCGTTAACT
GAAATTGTTA CAGCATTATC AGAACGAGCG AAAACATTAA AAGAATTAGC CGCTTCAAGC
CGTTACTTCT ATGAAGATTT TGATAACTTC GATGAAGCAC AAGCTAAGAA GCATCTACGT
GGCGTGGCAC TAGAGCCTTT AACATTGTTC AATCAAAAGT TATCTGAACT AAATGATTGG
AGCGTAGAGA ATATTCACAA CGTTATTGAA GCCACAGCGA CAGAACTTGA TGTCGGCATG
GGTAAAGTAG GTATGCCTTT ACGCGTTGCG GTTACTGGCG CAGGACAGTC TCCTGCATTA
GATTTAACCT TGTTCTTAAT CGGAAAAGAA AGATCTGCAC AAAGAATATC CAAAGCGATT
GAATTTGTAG CAGATAGAAT AAATTCCTAA
|
|---|
| Protein sequence | MTTKTRFAPS PTGFLHVGGA RTALYSWLHA RANNGEFVLR IEDTDIERST QEACDAILDG
MNWLGLTWDE GPYYQTKRFD RYNEIIEQML DKGTAYKCYC SRERIESMRE DQAAQGLQQK
YDGCCRNLAP RDTDEPFVIR FKNPIEGSVI FDDHVRGRIE ISNDMLDDLI IKRTDGVPTY
NFCVVVDDWD MGITCVVRGE DHINNTPRQI NILKALGAPI PEYAHVSMIL GDDGAKLSKR
HGAVGVMQYR DDGYLPEALL NYLVRLGWSH GDQEIFSMEE LKTLFKLDDI NKAASAFNTD
KLIWLNQHYI KSLDPVYVAS HLQWHMDDQK IDTSNGPALT EIVTALSERA KTLKELAASS
RYFYEDFDNF DEAQAKKHLR GVALEPLTLF NQKLSELNDW SVENIHNVIE ATATELDVGM
GKVGMPLRVA VTGAGQSPAL DLTLFLIGKE RSAQRISKAI EFVADRINS
|
|---|
| |